| Id Trinity | TRINITY_DN45875_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_356423 |
| Sequence | GCAGAAAGGGGATAGTGAGAGAAGAGCGAGTGAGCGAAGCGAGTGGACCTTCCGAGTTTGTCTCCGATCCCATCCCAAACATAATTTGTTTCCCCCACTC GCCATACAACAACTTTCAAATTCTAACTTCCGTCACCTATCCCCGCTTTTTCAGTAAGAGGGAGCAACCAAAGTGCCAATATATATTGCAGAATATATTC AGAACAGAATGCATGATAGTGAAGTGAGTGAAATATGGTTGATGCATTAAATGAAGCGCAACGCCGGGGTAGTGCCCTAGCTATTTCTCCAAAGAGGGAC AGTGCTATGTTTGAAGGGGACAGAGATTTTGAGCCGCACAATGGAATTGAATTTGAATCTCATGAAGCAGCCTATTTATTTTATCAGGAATATGCCAAAT CTATGGGATTCACCACTTCAATAAAAAATAGCAGACGCTCAAAGAAAACAAAGGAGTTTATTGATGCCAAATTTGCATGCTCCAGGTATGGAGTTACACC TGAGTCTGACAGTGGGAGCAGTCGAAGACCAACTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAGAGAAGGCCGGATGGAAATTGGATCATT CATGAATTTATAAAGGAACATAATCATGAACTTTTACCAGCTTTGGCATATCATTTTCGGATTCATAGAAATGTGAAGTTAGCTGAGAAGAATAACATTG ACATTTTGCATGCTGTTAGTGAACGCACCAGAAAGATGTATGTTGAAATGTCTAGGCAGTCAGGTGGCTCTCAACGCATTGGGTCTCTCTTGGATGACAT AAACTATCAGTTCGATAGAGGCCAATATTTGGCTTTAGATGAGGGAGATGCCCAAGTTATGCTTGAATATTTCAAGCGAATTCAAAAGGATAATCCCAAC TTCTTCTATGCTATAGATTTAAATGAAGAGCAACGGTTAAGAAATCTATTTTGGGTTGATGCAAAGAGTAGAAGCGACTATCTCAGCTTTAATGATGTAG TTTCATTTGATACCACTTACATAAAAAGCAATGATAAGTTGCCATTTGCTCCTTTTATTGGAGTGAACCATCACTCTCAACCTATATTGATTGGATGTGC ATTGGTTGCGGATGAGACTAAATCGACATTTGTTTGGTTAATGAAGACATGGCTTAGAGCGATGGGTGGTCAAGCTCCCAAAATTGTAATCAGTGATCAG GACAATGCTTTGAAGACTGCAATTGAAGAAGTCTTCCCAAACGTCCGACATTGCTTTTCTCTTTGGCACGTGCTAGAAAAGATACCTGAAAATCTGTCTT TTGTGATCAAACAATATAAGAACTTCTTGCCAAAGTTTAACAAGTGCATTTTCAAGTCATGGACAGATGAACAATTCGACATGAGATGGTGGAAAATGGT CTCTAGATTTGAACTCCAATATGATGTGTGGTTTCAGTCATTGTATGAAGACCGGAAAAAGTGGGTGCCGACATATATGGGGGATGCATTTTTAGCTGGA ATGTCTACACATCAACGCTCTGAAAGTATGAACTCTTTCTTTGACAAATATATTCATAAGAAAATCACCCTTAAAGAGTTTGTGAAACAATATGGGATAA TTCTTCAGAATAGGTATGAAGAGGAAGCCATTGCAGATTTTGATACTTTGCACAAACAACCAGCACTTAAATCTCCTTCACCTTGGGAGAAACAAATGTC AACAGTTTATACACATGCAATATTTAAGAAATTCCAAGTTGAAGTTTTGGGTGTAGCTGGCTGTCAATCTAGGATACAGGCTGGAGATGGAACTATCGCA AAATTTATAGTTCAAGATTATGAGAAGGATGAAGAGTTTTTGGTAACATGGAATGAGATGAGCTCAGAGGTCTCTTGCTTCTGTCGAATGTTTGAATATA AAGGCTTCCTTTGCAGGCATGCATTGAGTGTTCTCCAACGTTGTGGCTGTTCAAGTGTTCCATCTCATTATATCATGAAGAGGTGGACCAAAGATGCTAA AAATAGCCAATCCTTGGCAGATAGGACTCGTAGGATTCAAACTCGGGTGCAACGTTATAATGACTTGTGTAAACAAGCTATTGATTTGAGTGAAGAAGGA TCGTTATCTGAAGAGAGCTATAATGTTGTTTTTCGTGCACTTGTTGACGCCCTGAAGAACTGCGTACTTGTAAATAATTCTAATCACAATGGTGCAGAAA CTAGCAACAATTCTTACAGCTTTCGTGAAACAGAAGAAAATCAGGGTATCCTTGCTTTAAAACCAAGTAAGAAGAAGGCCACAGCTAGGAAAAGAAAGGT GCAATTAGAGCAGGATGTTATACTTGATGCGCAAGATAGCCTGCACCAAATGGATAACCTTAGCTCAGATGCAATAACTCTTAATGGATATTACGGTGCC CAGCAAAATGTGCAAGGACTGCAGGTACAGTTGAACTTAATGGAGCCACCTCATGATAGTTACTATGTTAATCAACAGAGCATGCAAGGCCTGGGTCCAT TGAATTCTATGGCTCCAAGCCATGATAGTTTTTTTCGAACACAGCAAAACATTCATGGGCTGGGAGGGCAATTGGAATTTCGTCCAACAACTACTTTTGG ATATAGCCTGCAGGTTTGTGCATGAAATGTGCCATGTCCTAGCATTTGAACTTGGAATAACAAAATTTGCACTTGGTTTTCATTGTCTTTAGTACATAAC TTTGATTGCAGGATGAGCCAGAACCTCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_141116; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_356423
| Blastp | Protein FAR-RED IMPAIRED RESPONSE 1 from Arabidopsis with 69.78% of identity |
|---|---|
| Blastx | Protein FAR-RED IMPAIRED RESPONSE 1 from Arabidopsis with 69.13% of identity |
| Eggnog | Protein FAR-RED IMPAIRED RESPONSE(ENOG410YB4A) |
| Kegg | Link to kegg annotations (AT4G15090) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441488.1) |
| Pfam | FAR1 DNA-binding domain (PF03101.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |