Ll_transcript_356425

• Id Trinity: TRINITY_DN45875_c0_g1_i6
• Name Transcript: Ll_transcript_356425
• Sequence: GCAGAAAGGGGATAGTGAGAGAAGAGCGAGTGAGCGAAGCGAGTGGACCTTCCGAGTTTGTCTCCGATCCCATCCCAAACATAATTTGTTTCCCCCACTC GCCATACAACAACTTTCAAATTCTAACTTCCGTCACCTATCCCCGCTTTTTCAGGCTAACATTGTATAGCAGTTATGGCAAGGTACACAAGGGTTGTATG CTTCTGATTTTTAAATTGCAAGATTTGCACTTATGAGAAACTTGAAGCCATTTGTCATGATTAACATCATAATATATTCAGAACAGAATGCATGATAGTG AAGTGAGTGAAATATGGTTGATGCATTAAATGAAGCGCAACGCCGGGGTAGTGCCCTAGCTATTTCTCCAAAGAGGGACAGTGCTATGTTTGAAGGGGAC AGAGATTTTGAGCCGCACAATGGAATTGAATTTGAATCTCATGAAGCAGCCTATTTATTTTATCAGGAATATGCCAAATCTATGGGATTCACCACTTCAA TAAAAAATAGCAGACGCTCAAAGAAAACAAAGGAGTTTATTGATGCCAAATTTGCATGCTCCAGGTATGGAGTTACACCTGAGTCTGACAGTGGGAGCAG TCGAAGACCAACTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAGAGAAGGCCGGATGGAAATTGGATCATTCATGAATTTATAAAGGAACAT AATCATGAACTTTTACCAGCTTTGGCATATCATTTTCGGATTCATAGAAATGTGAAGTTAGCTGAGAAGAATAACATTGACATTTTGCATGCTGTTAGTG AACGCACCAGAAAGATGTATGTTGAAATGTCTAGGCAGTCAGGTGGCTCTCAACGCATTGGGTCTCTCTTGGATGACATAAACTATCAGTTCGATAGAGG CCAATATTTGGCTTTAGATGAGGGAGATGCCCAAGTTATGCTTGAATATTTCAAGCGAATTCAAAAGGATAATCCCAACTTCTTCTATGCTATAGATTTA AATGAAGAGCAACGGTTAAGAAATCTATTTTGGGTTGATGCAAAGAGTAGAAGCGACTATCTCAGCTTTAATGATGTAGTTTCATTTGATACCACTTACA TAAAAAGCAATGATAAGTTGCCATTTGCTCCTTTTATTGGAGTGAACCATCACTCTCAACCTATATTGATTGGATGTGCATTGGTTGCGGATGAGACTAA ATCGACATTTGTTTGGTTAATGAAGACATGGCTTAGAGCGATGGGTGGTCAAGCTCCCAAAATTGTAATCAGTGATCAGGACAATGCTTTGAAGACTGCA ATTGAAGAAGTCTTCCCAAACGTCCGACATTGCTTTTCTCTTTGGCACGTGCTAGAAAAGATACCTGAAAATCTGTCTTTTGTGATCAAACAATATAAGA ACTTCTTGCCAAAGTTTAACAAGTGCATTTTCAAGTCATGGACAGATGAACAATTCGACATGAGATGGTGGAAAATGGTCTCTAGATTTGAACTCCAATA TGATGTGTGGTTTCAGTCATTGTATGAAGACCGGAAAAAGTGGGTGCCGACATATATGGGGGATGCATTTTTAGCTGGAATGTCTACACATCAACGCTCT GAAAGTATGAACTCTTTCTTTGACAAATATATTCATAAGAAAATCACCCTTAAAGAGTTTGTGAAACAATATGGGATAATTCTTCAGAATAGGTATGAAG AGGAAGCCATTGCAGATTTTGATACTTTGCACAAACAACCAGCACTTAAATCTCCTTCACCTTGGGAGAAACAAATGTCAACAGTTTATACACATGCAAT ATTTAAGAAATTCCAAGTTGAAGTTTTGGGTGTAGCTGGCTGTCAATCTAGGATACAGGCTGGAGATGGAACTATCGCAAAATTTATAGTTCAAGATTAT GAGAAGGATGAAGAGTTTTTGGTAACATGGAATGAGATGAGCTCAGAGGTCTCTTGCTTCTGTCGAATGTTTGAATATAAAGGCTTCCTTTGCAGGCATG CATTGAGTGTTCTCCAACGTTGTGGCTGTTCAAGTGTTCCATCTCATTATATCATGAAGAGGTGGACCAAAGATGCTAAAAATAGCCAATCCTTGGCAGA TAGGACTCGTAGGATTCAAACTCGGGTGCAACGTTATAATGACTTGTGTAAACAAGCTATTGATTTGAGTGAAGAAGGATCGTTATCTGAAGAGAGCTAT AATGTTGTTTTTCGTGCACTTGTTGACGCCCTGAAGAACTGCGTACTTGTAAATAATTCTAATCACAATGGTGCAGAAACTAGCAACAATTCTTACAGCT TTCGTGAAACAGAAGAAAATCAGGGTATCCTTGCTTTAAAACCAAGTAAGAAGAAGGCCACAGCTAGGAAAAGAAAGGTGCAATTAGAGCAGGATGTTAT ACTTGATGCGCAAGATAGCCTGCACCAAATGGATAACCTTAGCTCAGATGCAATAACTCTTAATGGATATTACGGTGCCCAGCAAAATGTGCAAGGACTG GTATTTTATATTTGTTGACCAATACATGATTACATATATCTTTATTTTAAGGAAAAATGTAATGCTTAAATAATATTTTTTGGTTTTTGTAGCAGGTACA GTTGAACTTAATGGAGCCACCTCATGATAGTTACTATGTTAATCAACAGAGCATGCAAGGCCTGGGTCCATTGAATTCTATGGCTCCAAGCCATGATAGT TTTTTTCGAACACAGCAAAACATTCATGGGCTGGTATGATACTTTTTATTATGTTATGCTATTTGTTTTTCGTTGAAATTATTGGGAAGTCTGATCATTT GACCAACTTTAAATGATGAAATTTTGCTAAGTCTGTATTGGTTTATCATGTAGGGAGGGCAATTGGAATTTCGTCCAACAACTACTTTTGGATATAGCCT GCAGGTTTGTGCATGAAATGTGCCATGTCCTAGCATTTGAACTTGGAATAACAAAATTTGCACTTGGTTTTCATTGTCTTTAGTACATAACTTTGATTGC AGGATGAGCCAGAACCTCAG
• Tissue: pods
• Gene name: LI_gene_141116;
• Additional information: details;

Expression of Ll_transcript_356425

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.5
• PS2: 0.1
• PS3: 0
• PW1: 0.6
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_356425

• Blastp: Protein FAR-RED IMPAIRED RESPONSE 1 from Arabidopsis with 70.76% of identity
• Blastx: Protein FAR-RED IMPAIRED RESPONSE 1 from Arabidopsis with 69.9% of identity
• Eggnog: Protein FAR-RED IMPAIRED RESPONSE(ENOG410YB4A)
• Kegg: Link to kegg annotations (AT4G15090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441490.1)
• Pfam: FAR1 DNA-binding domain (PF03101.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;