Id Trinity | TRINITY_DN45880_c2_g3_i1 |
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Name Transcript | Ll_transcript_356064 |
Sequence | TCTAGATTCAATGGAATTCATACATATAGGAAGAAGCCAAATCAAATATATATTTTTACTTTCGACCAACTTTCAATTGTTAATACAATATATAAAAACC GATATTACAAATAGTACTACATCATTAAACGTGAAATATCCATAGTTTATTATATCTTGTAATTAAAAGTTTAATATTAATAACTTTTGGGATGATGAGT AGAAGAGAATGTATGTGTGATGCTCTTTCTATTTGAAGGCTGTGGTATTCGTCACATTCACGCCACCAAGCTTATACATTCATCTTCTTCATCAATATTT TCCACACTTTTCTAATATCTTTCTTTACTCCTTCCTTATTTTGTTTTCTCCTGAAATCTTGTCAAATAATCTATGTGCTTTTTCAGCCAACTTCCATCCA TAGAAATTCAAGCAAACAAGGGGCACAAGAAGCTTCCAACTTCAACCATCATTCTCTCTTCTTTTCCACTTCAAAACATCTTAAGTAGTAGCTATTCCAT TTTCCTGAAGCTTTGTTTATAGATCTTTCAACATACACCACTTACCACTTTTTCAGTTTCTCTTCCCAAAATCAGACATAAACCCTTTAATTCACTTCCT TGAAAGGTTTCAACTTGATCAACTTTCCACTGTGACAGAAAGTGAGTCCTGAAGCTCAATTTAGATCTTTGACACAACCTTTTTTTGAACTTGATTGATT CTCTAACCAAAATCAGACACAGACCCTTTGATTCTTTCCCTTGAAAGGTTTGAACTTTGTTCTCAAATTATCAGCTTTTACAGAAAGTGATTAAAAATTC ATATAGAAGAAAAATGCAAGACCCAACATTATTTCAACCTATGAAACCCCAATTTCCTGAACAAGAACAACTAAAGTGCCCACGTTGTGATTCCACAAAC ACTAAATTCTGCTACTACAACAACTACAACCTTTCGCAGCCGCGCCATTTTTGCAAGAATTGTAGAAGGTATTGGACCAAAGGAGGTTCCTTGAGAAACA TTCCTGTTGGTGGTGGAACTAGAAAGAACACAAAACGCCCATCTACAAATTCCAAACGTGCTGCATCATCATCATCACAATCACCATCACCATCAGTTTC CTCAGTTTCAATTACACCTCAGGTGCCAGCTGCAGCTACAGAAATTGAGCCGAACCGGAATGATCCGGCGCAGGCTTATTCAATTAGTGGGAGTTTCAGT TCGCTTCTTGCATCAGCTGACAATTTGGGGAGCCTACTCGAGGGTTTGAATTCAAGTGGGTCAAATATGAAAATGGTGCAAATGAATGAATGTGGAAGCT CTGGCCCAATGATGAATTTGGATCCGGGTAGGAATAATATCGGGTCGGGTGTGCAGGGTAGTGGCAATGCTGCAGAGAACTTTATGAATATGCAAAATGG TGATTCAAGCTGTTGGAATGGTAGCAGCAATGGTTGGTCTAACCTTGCAATATACACACCAGGGTCAACTTTTCAGTAGAAGGAACATGTTTCCGTGCAC GAGGCTCCTCCTTAGCGAGGGTTTCGGAAGGGTAGAGATGAGTCTTATCCCTCAAGCAAAAGCAAAAGACACCAACTGGTGGGAAAAAATGAACCTTTTT ACATAATGCTGATTATTCTTGTATTTATATAGTTAGATATTATGGTTGTGAGAAGAGTTATATAATTAGCTGAAGCCTATTGATACCATGCTATGGAGAA TTGGAAACCAGAGTTGCATCCTTTAGGTAAACTCTTCTTTCCTTTTTTTGGGTTTTTTATGTGTTTGTGGTTGTGTGCTTCAATCTTATCAACAGTGGTA AAGAAAGTAAGATTTTTTAGGGGAGAGTATGGAAAGATATATATATATGTTGTTAACTTCTTATAGTGTTGCCATGGCTTAATCTATAGCATAGTATATG TATTATTTTACACGTGTAATTTGATATATATATATATATATATATATATATATATGATTTTAATCATAGCTTTTTAAGCATCC BLAST |
Tissue | pods |
Gene name | LI_gene_141130; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_356064
Blastp | Dof zinc finger protein DOF1.7 from Arabidopsis with 56.64% of identity |
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Blastx | Dof zinc finger protein DOF1.7 from Arabidopsis with 82.67% of identity |
Eggnog | Zinc finger protein(ENOG410YJE1) |
Kegg | Link to kegg annotations (AT1G51700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436481.1) |
Pfam | Dof domain, zinc finger (PF02701.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |