| Id Trinity | TRINITY_DN45884_c0_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_355636 |
| Sequence | CGCATTATATTTGTACTGCACTGTGATAGCACAGTGAGAGTGGCATGCCCTAGAATCTGCACACAACCTGTTTGTTGAAAAGTCTCTCTTAACAATGGAG CATCGAAGGTTACAACAATTAACCAAAATCACTATCAACGACAAGAAATTCATACAAACCGCTCTCCTCTCCGACCTCCGTGTTGACGGCCGCCGCCCTC TGGACTACCGCAAACTCACCGTCAAATTTGGCAGAGACGACGGTTCCGCCGAGGTAAAGCTCGGCGATACCTACGTCATCTCCTTCGTCACCGCTCAACT TCTTCAGCCCTACAAAGACCGTCCCAATGAAGGCAGCCTCTCCGTCTTCACCGAGTTCTCTCCCATGGCCGATCCTTCCTTCGAACCCGGCCGCGCTTCC GAGTCTGCGGTCGAGCTGGGAAGGATCGTGGACCGTGGGTTGAGGGAGAGTAGGGCGATTGATACAGAATCTCTGTGTGTTGTGGCAGGGAAGTTGGTTT GGGCGATTAGGATTGATATACATGTGATTGATAATGGTGGTAATTTAGTTGATGCTGCTAATGTTGCTGCTTTGGCTGCTTTGTTAACTTTTCGGAGACC CGAGTGCTCGTTGACCGGAGAAGATGGTCAGCAAGTTGTGGTGCACCCTCCTGAGGTTGAACTTAGCTCCTTTACTTTATTGTTAAATTGTGTTTTTGAA AATTACATTATTTCAATAATTGATGATGATATCAGTTAATGTATAGTTTTTTTTAAACTGAAAAATGATGTTGTGTGGAGAGGCAAACACAGTTTGATAT ATTAGAAAAGGACGGCCGAATAATGTGCACAATATCTCCCATTAGAAGAGAGACTTTTTCCGGTATTTTACCCCATGGTTTGTTTACATTATATTGTGAT TGCGATACTATTATTTAGTGTTGTCAACCCTAGCTTAGAATGTGTTTGAATTACCTGCAAAAGATAGATTATTTAAATAGTTTGTTATACTTTGTAGTCA ATTATAATAGAATCAGTTCATATTTATGCACTTATTTGCTGAAAAGTGATTTAAGAAGCATTGTAGTCTACACTCTACAGGGTGTTTGGTTTGGATTATT TGCTAAAATTTATAACTTTTAGGAAAGATCTTCTTATTAAGAGGGGAGACAGAAGCTAGAATCAATAGTTTCTGGCCAATGCCTCATGACTAATTGGTAA ATACTTGCTTTACATGACATTTTATTTTCCACTTGTTTACTTGTCATTGCTTGATAGGAGCGTGATCCACTTCCTTTGATTATACACCATCTTCCTATAG CTGTCACCTTTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_141153; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_355636
| Blastp | Exosome complex component RRP45B from Arabidopsis with 72.68% of identity |
|---|---|
| Blastx | Exosome complex component RRP45B from Arabidopsis with 72.68% of identity |
| Eggnog | Exosome complex(COG2123) |
| Kegg | Link to kegg annotations (AT3G60500) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421239.1) |
| Pfam | 3' exoribonuclease family, domain 1 (PF01138.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |