Ll_transcript_355773

• Id Trinity: TRINITY_DN45885_c0_g4_i2
• Name Transcript: Ll_transcript_355773
• Sequence: GAAGAATTTTGTATATTTGTATATTTGTATATTTGTATGTGGTGTGGTGTCCGCAGCGCAGGAGGGTAAGGCAAGCTTACTAGCGTCTTATCCTGATGGC CATCACTTTGTGTTATGTTTCTTCGCTCTCTCTCTGAATTCATTATTTGAATTTATCTCTCTCTCTCTCTCTCTCAGCCATGTCCTCGTGTTTATTGCCG GATACTTTCACTTTCCGATACGCTCTTCTTCCATCAGCAACTTCATCCATAAAAAGCAGAGATTTTATTGCTTTCCAGCCCCATTGTGTTTTATCAACAA CTCCTTCACCCACTGCTCTTACTTTGGAAAAATTGGCACTTTCATCATCATCATCCTCCTCATCATCATCATCCCCATATCTTCCTTCATCCACACAGGA AAACTTCAAAGCAACCTTATCTACACAATCACTCCTTACTAGTGAAGAAAATGTAATAGCTGCTGCTGCTTCTGAAGCTGTTGCTCTTGCTAAAGCAGCT TTGAAAGTTGCAAAGGTTGCTGCCCTACTTGTTAAAAACAAGTCCCCACCAGAAGCAGCATATACACCCCCACATGATTCTTCCAAATCTGATAATTTAA TTCTTCTCAAATGGGTTCAACATTTGGAAGCACAAGAAGACGGTGTAGTATCTGATTCAGAAGAACATGTTTACAATGACATAAAAGAGGAGTCTGATGA TACGGAACCCACCTATGAAGAACTTGAGCGTCTCAATCAGCAGCTCTCTGATAGTATAGCTGTAAGATCTACACGCCAAACAGAAAGAAAAGCTAAAAGA GTCAGAGCGGCAGAGAAGTCTGCCACACACATGGTTTCTTTTAAGTCCGGCTCAACCAGCAGGAAAAAGCGCGTTCCTACACAAGAAGTAGACTATTCTG ATCCACTTCGTTACCTAAGAGCAACGACTAGCACTTCTAGGCTTCTCACTCCATCAGAAGAAATTGAGTTGTCCGAAGGAATACAGGACCTACTAAAGCT TGAAAAACTCCAGGAGGATCTCACAGAAAGATGTGGTAGCCAGCCCACGTTTGCTCAATGGGCTGCAGTGGCAGGGGTAGATCAGAAGACCCTAAGGAAG CGTTTAAATTATGGCATGTTTTGCAAAGACAAAATGATTAAAAGCAATATACGGCTTGTCATATCAATTGCAAAGGGTTATCAGGGTGCTGGGATGAATC TGCAAGATCTTGTCCAGGAAGGATGTCGAGGCCTGGTAAGAGGTGCAGAAAAGTTTGATGCTTCCAAGGGTTTCAAGTTCTCCACCTATGCTCATTGGTG GATTAAACAGGCAGTTCGCAAATCGCTTTCTGATCAGTCAAGGACTATCCGCTTGCCATTTCACATGGTGGAGGCAACTTACAGAGTGAAAGAGGCTAGA AAACAATTGTATAGTGAAAATGGAAGGCAGCCTGATGACGAAGAAGTTGCTGAGGCAACTGGACTGTCAATGAAGAGGCTTAGTGCTGTACTTTTAACCC CAAAAGCTCCTAGATCTCTGGAACAGAAGATTGGGATAGACCAGAATCTTAAACCTTCAGTCTGTCCTAATCTTTATTCAATTTTACACATTAGAAATAA CTCATGTTGTTTCATATGATGTTCATTTTGATGATATATGCATGTTTCATTTTTGGACAGGAAGTAATCGCTGATCCTGAAGCGGAAACAGCGGAAGAAC AGCTGATCAAGCAATTCATGAAGAAGGATCTTGAGAAGGTACTGGACAGTCTGAATCCAAGAGAGAAGCAGGTGATAAGATGGAGATTTGGAATGGATGA TGGAAGGATGAAGACGCTGCAAGAGATTGGGGAAAGCATGGGTGTGAGTAGGGAGAGAGTTAGGCAAATTGAGTCATGTGCTTTTAGGAAACTCAAGAAC AAGAAGAGAACCAAGCATTTGCAGCAGTATCTCATTTCATAAACCCACCACCAAATATTATTCAAATTACAATGTTGGATGTGAGGTCTCTAGCCACTTT TGTTCTTCCTTTGTATTTTATTTCTCCATTTTTTACTTCATTCTCTACAAGAGAAAAACAAAACGTTATTGTTAGTGTATTAGGAAACCGATGTACACAC AAAGGGATAACTTTTGATGAAGAGTCCAGCATTTTTTAATGTACATGAAATGATTCAAACCAAATAAGACTCTTGAAATGAGTAATATTTTTCTTGAAGA CTTAAATCAGCCAATATTGGTAAGTGCAAATACAATCATCATCATCATCTGCTTCATCACACAACACCACCACCACCAAAGAAGAGGCAGCTCCAACATC AACGTCCTCCCACTTCTTACAACCACCTTTCACACTCTCTCTTTTCCTTCCAAACCTGTCTGAGCATATTTCCACAAGTACAACTCAATGATGGTCACTA CTAGTTCATGGCAAGCAAAC
• Tissue: pods
• Gene name: LI_gene_141167;
• Additional information: details;

Expression of Ll_transcript_355773

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 0.4
• PS2: 1
• PS3: 0.4
• PW1: 0.2
• PW2: 0.5
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_355773

• Blastp: RNA polymerase sigma factor sigB from Arabidopsis with 58.63% of identity
• Blastx: RNA polymerase sigma factor sigB from Arabidopsis with 71.66% of identity
• Eggnog: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)(COG0568)
• Kegg: Link to kegg annotations (AT1G08540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414778.1)
• Pfam: Sigma-70 factor, region 1.2 (PF00140.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;