Ll_transcript_355801

• Id Trinity: TRINITY_DN45885_c0_g4_i5
• Name Transcript: Ll_transcript_355801
• Sequence: GAAGAATTTTGTATATTTGTATATTTGTATATTTGTATGTGGTGTGGTGTCCGCAGCGCAGGAGGGTAAGGCAAGCTTACTAGCGTCTTATCCTGATGGC CATCACTTTGTGTTATGTTTCTTCGCTCTCTCTCTGAATTCATTATTTGAATTTATCTCTCTCTCTCTCTCTCTCAGCCATGTCCTCGTGTTTATTGCCG GATACTTTCACTTTCCGATACGCTCTTCTTCCATCAGCAACTTCATCCATAAAAAGCAGAGATTTTATTGCTTTCCAGCCCCATTGTGTTTTATCAACAA CTCCTTCACCCACTGCTCTTACTTTGGAAAAATTGGCACTTTCATCATCATCATCCTCCTCATCATCATCATCCCCATATCTTCCTTCATCCACACAGGA AAACTTCAAAGCAACCTTATCTACACAATCACTCCTTACTAGTGAAGAAAATGTAATAGCTGCTGCTGCTTCTGAAGCTGTTGCTCTTGCTAAAGCAGCT TTGAAAGTTGCAAAGGTTGCTGCCCTACTTGTTAAAAACAAGTCCCCACCAGAAGCAGCATATACACCCCCACATGATTCTTCCAAATCTGATAATTTAA TTCTTCTCAAATGGGTTCAACATTTGGAAGCACAAGAAGACGGTGTAGTATCTGATTCAGAAGAACATGTTTACAATGACATAAAAGAGGAGTCTGATGA TACGGAACCCACCTATGAAGAACTTGAGCGTCTCAATCAGCAGCTCTCTGATAGTATAGCTGTAAGATCTACACGCCAAACAGAAAGAAAAGCTAAAAGA GTCAGAGCGGCAGAGAAGTCTGCCACACACATGGTTTCTTTTAAGTCCGGCTCAACCAGCAGGAAAAAGCGCGTTCCTACACAAGAAGTAGACTATTCTG ATCCACTTCGTTACCTAAGAGCAACGACTAGCACTTCTAGGCTTCTCACTCCATCAGAAGAAATTGAGTTGTCCGAAGGAATACAGGACCTACTAAAGCT TGAAAAACTCCAGGAGGATCTCACAGAAAGATGTGGTAGCCAGCCCACGTTTGCTCAATGGGCTGCAGTGGCAGGGGTAGATCAGAAGACCCTAAGGAAG CGTTTAAATTATGGCATGTTTTGCAAAGACAAAATGATTAAAAGCAATATACGGCTTGTCATATCAATTGCAAAGGGTTATCAGGGTGCTGGGATGAATC TGCAAGATCTTGTCCAGGAAGGATGTCGAGGCCTGGTAAGAGGTGCAGAAAAGTTTGATGCTTCCAAGGGTTTCAAGTTCTCCACCTATGCTCATTGGTG GATTAAACAGGCAGTTCGCAAATCGCTTTCTGATCAGTCAAGGACTATCCGCTTGCCATTTCACATGGTGGAGGCAACTTACAGAGTGAAAGAGGCTAGA AAACAATTGTATAGTGAAAATGGAAGGCAGCCTGATGACGAAGAAGTTGCTGAGGCAACTGGACTGTCAATGAAGAGGCTTAGTGCTGTACTTTTAACCC CAAAAGCTCCTAGATCTCTGGAACAGAAGATTGGGATAGACCAGAATCTTAAACCTTCAGAAGTAATCGCTGATCCTGAAGCGGAAACAGCGGAAGAACA GCTGATCAAGCAATTCATGAAGAAGGATCTTGAGAAGGTACTGGACAGTCTGAATCCAAGAGAGAAGCAGGTGATAAGATGGAGATTTGGAATGGATGAT GGAAGGATGAAGACGCTGCAAGAGATTGGGGAAAGCATGGGTGTGAGTAGGGAGAGAGTTAGGCAAATTGAGTCATGTGCTTTTAGGAAACTCAAGAACA AGAAGAGAACCAAGCATTTGCAGCAGTATCTCATTTCATAAACCCACCACCAAATATTATTCAAATTACAATGTTGGATGTGAGGTCTCTAGCCACTTTT GTTCTTCCTTTGTATTTTATTTCTCCATTTTTTACTTCATTCTCTACAAGAGAAAAACAAAACGTTATTGTTAGTGTATTAGGAAACCGATGTACACACA AAGGGATAACTTTTGATGAAGAGTCCAGCATTTTTTAATGTACATGAAATGATTCAAACCAAATAAGACTCTTGAAATGAGTAATATTTTTCTTGAAGAC TTAAATCAGCCAATATTGGTAAGTGCAAATACAATCATCATCATCATCTGCTTCATCACACAACACCACCACCACCAAAGAAGAGGCAGCTCCAACATCA ACGTCCTCCCACTTCTTACAACCACCTTTCACACTCTCTCTTTTCCTTCCAAACCTGTCTGAGCATATTTCCACAAGTACAACTCAATGATGGTCACTAC TAGTTCATGGCAAGCAAAC
• Tissue: pods
• Gene name: LI_gene_141167;
• Additional information: details;

Expression of Ll_transcript_355801

FPKM

• PAB: 4
• PNAB: 9
• PS1: 6.5
• PS2: 5.7
• PS3: 5.7
• PW1: 7.1
• PW2: 7.8
• PW3: 6.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_355801

• Blastp: RNA polymerase sigma factor sigB from Arabidopsis with 62.37% of identity
• Blastx: RNA polymerase sigma factor sigB from Arabidopsis with 74.14% of identity
• Eggnog: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)(COG0568)
• Kegg: Link to kegg annotations (AT1G08540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414778.1)
• Pfam: Sigma-70 factor, region 1.2 (PF00140.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;