Id Trinity | TRINITY_DN45888_c0_g1_i10 |
---|---|
Name Transcript | Ll_transcript_356241 |
Sequence | CATCAACGGTACGAACTACGAAGCTTCGAGATATTCCACTTCGAACACAATCAAAATGATTCGGAAACTTGAATTTTTATTTTCATAAGCTAAAAGTATA TTGAATGCACCAGAGGTGCAGACCTACACGGAAACTTGAAAATTGAAACGTACAATGCGAATTTTAGTTTACAGATTTGAAATCTTGAAATCGAGGGAAA GCGGTGAAGAAATCATGTCAAACATTACAGTTTGTGTTCGTTTCAGACCTTTGACTTCAAAAGAGAAGCCACACGGCGATGATTCTGTCTGCATTCGCTG CATTGATTCCGAAACTTTCATTTTCAAGGATGAGAAGGATGAAGAATTGATGTTTAGCTTTGATAAAGTGTTCTATGAGAAATCCGAGCAAGTTGATGTC TATCAGTTCCTAGCTCTTCCCATTGTTAGAGATGCTGCTAATGCAATTAATGGAACAATTATCACTTATGGCCAGACTGGAGCTGGGAAGACATATAGTA TGGAGGGTCCTGGTATCCTAGAATGTGATGAGCAGAAGAAGGGCTTGCTTCCCAGAGTTGTAAAAGAACTTTTTGATTGCATAAATCTTTCAGAAGAAGA AATGACATATTCAATCAAACTGTCGATGGTACCGAGACACTTACTAATTAAAACTAGCATGTAACTACAAAATCATCTAGTTGCAGTAAGTCATGTCTCT AACTTTCTTTATAACTTGTTCAGGTTGAAATCTACATGGAAAAAGTAAGGTATACATAGTGGTTAAACTTGGGGTGTAACGTAGTAGTTTCTGAAAGGCA ATTGTGTTACCTTTGATGCAAAATATAGTTTTGATGTGAATTGGGATGTAGTTTAACTTCAAATAACTGTCTTCTTATATAGAGACCTTTTCGATTTATC AAAAGACAACTTACAGATTAATGAGAGTAAATCACGCGGAATATTTTTACCCGGTGTGACAGAGGTGAGTACTTCTCTGGGAACTTTATTTCTCAATTCA TTATAATTATTCTTTCATTCTGAAGCTACTTTGTTGTGTACAATTAGGTTGTTAGGAACCAGAAAATTTGAGTAAGGAAATAGATGTATTGAAAATGTAT TACAAGGAAGAACCCTGTAACCCCAGAGGTAAGCTCCTTAAGAGGAATGCGTAGAGCACTCTCTGTCCACTGCCCGCAAAATATTGAACTCACTACCAAA ATGAATTCTCTCCCCAAAGTTACTCCTGCTTACTCTCCTTTCCTCAAGTATTTCTTTATTTTTCCAGTTCTCTGGACAAAGGATTCTAACATATATGTTC TCAATATAAGACTAGTTTAGTGTACAATATTTGCTATGTTGCTACGTTCAATTTCAAAACTTGAATCCCAGGCCCAGTTATGCTCTCACATTCAATCACA TAGGTAAAGAATAAACTCAAGCTCATGCTATAAATTAAAGCAGCTAAGGCTGCTAAGTACTAACAGTTGAGCATATGAGCTGATTCAGCTAGTAGAGCAG AGTGGAATTATTTTCTACTTTATATGCAATTAACTCTTCACTGTACGTTACAAGATAATACATTTTAAGAAAAAACTAATACACGGTTCTTATCCATTTG ATGTCGTATAGTACTAACAAGATCCTTTTCAGATCACTGTCCGGGATCTTGCTGAAGCATTTCAAAGCCTATATGTAAGAAAATAACATGAGTACCACTT TTCAGTTTGATACAATGTATTTTTGTTTCTAATTCTGATCCCAAATATGTAGAGCGGGATAGCTAACCGAGCAGTTGGTCAGACCCGTATCCTGCTTTGA CTCCTTTTATCCTTTATTCAGTACTTTCCATTTGTGGTTAAAATTACATAATAGATTAGGTAAGTTCCCGGTTTTCTTGAGGAAGAAATAGTAGAGGTGG TAAGGCCACTTGCATCTGCAGCCATCCTTAACATAAAACATGTAGAAATGAACATGGCCAGCAGTAGAAGTCATTGTGTTTATATATTCACAATCCAGCA AGAATTTTCAAGAGATAAAAGGACGAGGTCCGGAAAACTAATTCTTGTGGACTTGGCGGGATCTGAGAAAGTGGAGAAAACAGGTGCTGAAGGAAGAGTT CTAGAAGAAGCCAAGGCCATTAACAAATCCTTGTCTGCTCTTGGGAATGTAATCAATTCTCTTACATGTGGTATGCAAGGAAAAGCAGGCCATATTCCTT ATCGCGATTCCAAGCTCACCCGAATTCTTCAAGATGCACTTGGAGGAAATGCTAGAACTGCATTACTCTGTTGTTGCTCCCCCAGTGCTTTTAATGCATC TGAGAGTCTGTCCACTTTCCGTTTTGGTGCAAGGGCTAAGCATATAAAGGCGTCACCTCATGTCTGTTACTGCGAAGACAAATCCGATACAGTTTCTATA AAGGCATCACCTCATGTCAGTTGCTATGAAGAGAAATCCGACACAGTTTCCATAAAAGAGTCACCTCATGTCAGTTCCTGTGGAGAAAAATCTGACATAG TGTCCAACCCTTCTTCTCCACCTGGTGACGGGTCAGGTGCTAGAATTTTGAACAAATTGGGGAAAAGATTGAGTGTTGAAGATGTGAAGTTACTAGAGAA ATTGTTCACAGTAGAGGGCATTCTCTTTGATCCCCTGTCAGTTGAAGAGGAGTCAGAAATAGAAGATCTTACCTTACAGACTATATCCTCACTACAAGAA GCCTTGGAAAAGCTCACATGTACTGTTAATGAGCTTAAAAGGGAGAACAACATTCTCAAGGCCAAAGTCGATGCCTCAACCAAGTCACTGTTTTGTAAGA TTACAGAGAAAAGTTTGATTCTTCAAGATATGATTTCGGGTATCCTGGCATCCTTCTTTCGCCGCCTGGGCCACACTTCTTTCCCAAGTTGATGGTACTA GCTCTTCATCCATCATGCCTTGCCTGCATTTAAATACTATCAAATTTATATAGGCACACTATATGGTTACTATGCATAAAATATAATGAAGATGGCTTAT GCCAGTTGAATTCTTATTGCACATTTTTGGATCTGGTTAAGAGTACTTGACATCAAATTTTAAACATATGTAAGTCATGTACATTTAGCTCAGATACTCA CTTTACCTTTATGTACATGTATTTCAAGACAAGAACAAAAATAGACTACTTTCCCATGATCAAGAAACATTTTCC BLAST |
Tissue | pods |
Gene name | LI_gene_141182; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_356241
Blastp | Kinesin-like protein KIN-1 from Arabidopsis with 55.97% of identity |
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Blastx | Kinesin-like protein KIN-1 from Arabidopsis with 55.31% of identity |
Eggnog | Kinesin family member(COG5059) |
Kegg | Link to kegg annotations (AT3G63480) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440535.1) |
Pfam | Kinesin motor domain (PF00225.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |