| Id Trinity | TRINITY_DN45889_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_356097 |
| Sequence | CTCCCATTCAATCATAACCGTTCTTCTTAAATTTCGCTAAAAACAGTCGAACAAATATTCGAGGTACACTATAACTTCGTACTCCTTCTCACTCACGATC ACATGATATTTCCTTTTACGCTGTCATTTTCCATCAAGAGTCCCGAACCTGCAAGCTATTGCAATTTTCTCAACACCTTCTTCTCTCTCCTCTTTGATCC CTTTTTTGGAATCTTCCTTCACCAACTATTTAATTGATTCGATTTTCTTCACTTATTTATTCAGAGTCTGCTTGTAACAGAAGGGTTTGGAGGAATAATA GGAATGAGAGGTTCAATTTTCAGGTTCTTTTAATCTTCCCATTAAGGGTTAGGGTTTCCTCTCGTTCTTTGTTTTTCTGGGTTGTTTAAATTTTATGCAA ATTTTGGGCTTGGTGGGTGTTTTCTGAATCAAATAACAAAAAAGTTTTGATTTTTATTTTGTGGGTGGTGATGGATTTGGGGATTTCTGATGAGTTGTTA GGAACTTTTGCTCCAATAGTAGTTTACTGGATTTATTCTGGGATTTATGTTGTTCTGGGTTTGTTTTCTGAGAACTATCGGTTGCACTCAAAGCAAGATG AAGATGAAAAGAATTTGGTGTCTAAATTTGATGTGGTTAAAGGAGTTCTTCTCCAACAAGTTGTTCAGGCTGTGGTTGCAACCCTCTTGTTTATGGTGAC AGGAAATGATAGCCAAGATACAAATCAGAATGCTTCCCTTCTTGTTTCAGCGAGGCAATTTATTACTGGTATGCTGGTTATGGACACATGGCAATACTTT ATGCATAGATACATGCACCACAACAAGTTCCTATACAAGCATATCCATTCTCGACATCACAGACTCATCGTGCCCTATTCATTTGGAGCTATGTACAACC ACCCTGTGGAGGGGCTTCTTCTCGACACCATCGGTGGGGCTTTATCTTTCCTCATCTCCGGTATGAGTCCCCGAGCCTCCATCTTCTTTTTCTCCTTTGC CACCATGAAAACCGTAGACGATCACTGTGGCTTATGGCTCCCGGGGAACCTTTTCCACATATTTTTCAACAACAATTCTGCTTACCATGATATACACCAT CAGCTTTACGGCAACAAATACAACTACTCACAGCCGTTCTTTGTTATGTGGGACCGAATCTTGGGTACGTACATGCCGTACACATTGGATAAGAAGTCAG GTGGTGGTTTTGAAACTCGGCCTTGTACAGATCAAAAAGATGATTAACCATTTTGCTTGGTGAGGCATTCCACCTATATTATCTTTGAGCAACACTGGCT GAATGTTCATGTTTGTATATACACATATGAATATGATGTCCCCATTTCTATTTTAGCATTTTTCTTTCCCTATTGTCCATACTAGATAGTTACTCAATAA AGAAATTTGAGGAGTTATCTATTAAGGTGTTACTTTCAGCTTTGTATTGCTGGTTGCTATTGTCATTCATTACCCTTCATGTCTTACCTTGTTTAACTCT TGCAAGTGACAATGCAATTTTTGATATCCAAATATTTACATTGTTTTATTGACTTTTGTGTGTTTGATTTTATTTTTTATAAAGGTCAAATTTTGACCAA ACTACAGCTATAAGATGATGATTGTTGGATTTGTATATGGACATGTCTCTAATCATGTACTTTGTGGAGGCCATAAATATTTATTATTGAATGAGATTGG TGCATGGATCTGTTAACTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_141183; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_356097
| Blastp | Sphinganine C4-monooxygenase 2 from Arabidopsis with 74.13% of identity |
|---|---|
| Blastx | Sphinganine C4-monooxygenase 1 from Arabidopsis with 77.39% of identity |
| Eggnog | fatty acid hydroxylase(COG3000) |
| Kegg | Link to kegg annotations (AT1G14290) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455661.1) |
| Pfam | Fatty acid hydroxylase superfamily (PF04116.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |