Id Trinity | TRINITY_DN45900_c0_g1_i7 |
---|---|
Name Transcript | Ll_transcript_392803 |
Sequence | CGTTAACACCTGTCGTACGCGCGTATTGCTTCTCTCTTCGTTTTTGCTTTATTTTATCAGTCTTCGCCTCCTCCCCCTTCCAATTCCAAGCAGAAGCAAA CAAAGTCACAAAACTTTGATAAAACCACGCGCGTACTTCTTCTCCCCTTTTGTCCTCATTCAAATTCAATCATTTCCAGTCTCTCCGCCCCCCCTCTCTC CCTCCCACACAGGCTCCAAATTCAAAATTCAGAATTCCACCATCGTCTTCTCCGCAACATCGAATCTTGTGCACTCTCAGTTACAGTAAAAAATGCCAGA AATTCAGTTGGGTAATCATACTATCAGATCACATGGAGTTAGTGTAGCCAGAATACATATGCATGACTGGTTGATTCTTTTGCTTCTTGTGATCATTGAT GCCGTCTTGAACATAATAGAGCCATTTCACCGTTATGTTGGAGAGGGGATGATGACAGATCTTAGTTACCCTTTGAAAGATAATACTATACCCTTTTGGG GTGTTCCAATAATAGCAATTTTGCTGCCGCTGGTTATCATTCTTGTTTACTATTTCATTCGAAATGATGTTTATGACTTTCACCATGCTATATTGGGCCT TCTATATTCTGTACTCATTACTGCGGTGATAACTGATGCTATTAAAGATGGTGTTGGACGACCACGGCCAGATTTCTTTTGGCGTTGTTTCCCTGATGGA AAGGCGGTGTTTGAATCAGTAACAAGAGATGTTAGGTGTACTGGAGATAAGAGTGTTATTAAGGAAGGGCACAAAAGTTTCCCAAGTGGACACACCTCTT GGTCTTTTGCTGGTCTTGTTTTTCTTGCTTGGTATCTATCTGGAAAAGTTAGGGTATTTGACCGCAGGGGCCATGTTGCAAAGCTCTGTCTTGTTTTCCT ACCACTCCTCGTTGCAGCTTTGATTGCTATTTCTCGTGTTGATGATTATTGGCATCATTGGACGGATGTGTTTGCTGGAGGTCTTATAGGAACGACAGTT GCTTCCTTTTGTTACTTACAATTCTTCCCACCTCCATATGCCACGGATGGTATGTCCATGAATTGTTCCTTTCATCCTTTATGTGTTGATATTGTTGTGA CAATTTGCTTCATTCCTGTTCAAACCTATGTCAGGATAGCTCTATTCTATATGGGTCTGAAATTTTAGGCAAGGATTCACTTTAGGTATTTTGGACAGGT CCAGACTTTGTGGGCATGATGAGAGAGTTTTATAGCTTAAGTAGGGCTTATTATTTGGCTTGTTAATGCTGCAAATATGTTGTTTAGTTTTGATAAAAAA TTGTGCATGTCAGTGCTTTTGGCTTCATTGGCATATCTTGTCGGTTAAACAATTCTATTAGCTTAACTGCAACACCTCAATGTCTTATAAAAAACTGCAT TGTTTAATCATGCTGCTTAATATGTTGGTGTTCACAATGGCCCCCGTCATCTCTAAGCATGTTAATTTGCTTATGGGCATTAAAATGGTTTCTAGTTCAT ATTTTGAACAACAATATCCATTCACAAATTTCTTATGCTTACATATCCCTATATCATTATGTGTATGTAGGTTGGGGACCTCATGCATATTTCAAGGTGT TGACTGAATCTAGAAATGTTAATGACATTCCTGTGTCCCAATCTTCTGAGCTTCAAATTGTATCTGTGCATAACCCACATCAACAAGATGGAAACACACA ACGCTACAATTTAGATTCAAGCCCACAAAATGCAAAACACACTACTTCCATTGACATATAGGAAATATCACCACATGTCATTTGTTTGGTTGGGATGGTT TTTGCATTAACAATATCTTGTTACTTTTTTCTCTTTTTTGTCAGCTTACTTTCTTAGTTGTCATATTAATTGTTTTATCACTTTCCCTCATGTGAAATTA TAGAGGAAATTACGTACACCAAGTAATTTCATAGCAATAAAGTCACAACTTTGATTTTTTTACAAGTATAGCAATGGTTTATAGTTTATAG BLAST |
Tissue | pods |
Gene name | LI_gene_141242; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_392803
Blastp | Lipid phosphate phosphatase 2 from Arabidopsis with 75.76% of identity |
---|---|
Blastx | Lipid phosphate phosphatase 2 from Arabidopsis with 75.76% of identity |
Eggnog | PHOsphatase(COG0671) |
Kegg | Link to kegg annotations (AT1G15080) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435239.1) |
Pfam | PAP2 superfamily (PF01569.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |