| Id Trinity | TRINITY_DN45905_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_393585 |
| Sequence | AAAGTTTTACCTTTTCCACGATTGACATGAGATGAAGGGAAAAGCTATCTCACGGTGACCGCAGGAATTGTCCATTGAGAGGCCACGCCTTAAATTCCCA ATTCATTCAATTAGAGACCTCTTCTTTTTCTCTCTCTCTTCGATTTCGATTTCGATTTCGATTCCAATTCCAATTCCAATTCTCCGTGTGTTGATTTTCT GAAGAAGGTCTTTGTATCGCCATGACCACCACAACTCTGCGGTGGCAACCACTGATTCCATTTTCACCGACTAATAAGAAGAACAGTAACCGTCGACATG GCCAAATGTTAACAGTAAAAGCATTCAATCGTAGAGAGATGGATAGTTTCGCACAGAGGATGGCTTCAGGGGAAGCATGGAAGGACGCATGGAGAACTGC CAACGACGGTTTCGAGCGCTTACTCTTCGAAGCTAAGAAGACCGCCGAACGCATTGACCGCCGTTACTCCGTTTCACACCGTCTCTCCTCTGTTGCTAGG TCTGCCGCTGTTAGAGCGCGTGAGATTGATCGTGACTTCGAGATTGGACTCCGTTGGCGCTCTTTCCAAATCGATTTTTCTAGAAACTGGCCTATGGTAT CTTTTTTATATATATATTTTTAAAATACTTCCTCAGATTACTATCATCGCTTTCTTTCATTTTACCTAGCTCTGTTTGGAGGACAACTATGTTATGGATG TAAGTGAATTGAGGAATTCTTACAATAATGCCCCTAACAAGCTAGCTTATAAGCTAGGCAATCTGGAAGTCTATACACTGGTAATACCTTATCTCGCATT AATAAGCTACTTGGATGCTTATAATAAGCTAGAATCTAGAAACTACAAACTACAAACTACAAACTGATTCTTCAAACTTGGTAAGTTACGTTACCTGATT CATTTCCATCTCTTTTATAAGATTAGATGATACACTGACTAATAAGTGTCAAATGACATGACAATACAAGCTTGCCTTATCAAAGACAGACTTGTAAGCT TCCCACTTATAAGCCACTTTACCAAACACCATCTGCTACCTTATTTCTTCATAATCTTATCAATTACACTCAAACTACGCAATTTATTCCCGCCATGCCA TGGCTAATGATGCCAATCTTTGTCAACAAAGTTGACGTTTTAATAATGGTATGTTATGTTTGCAGTACAGGATGCAACTCAATAAGTTCCTGAATAGTCC ACTTGGTAGGAGCTTTGCTACAATTTTCTTCATCTGGTTTGCTTTATCTGGTTGGCTATTTCGGGTTCTCATCTTTGCAACATGGGTACTTCCATTTGCT GGACCTCTTCTCATTGGCACTTTGGCCAACACCTTAGTTATTAAGGGCACTTGTCCGGCTTGTCAGATGCAATTTGCTGGTTACAAGAACCAAATAATCC GATGTACTGGTTGTGGAAACATTGTGTGGCAACCTAAAACTGATTTCTTTTCAAGAGGTGCTAAAAGCAAATCTAACTCCAAGTCAGACCCTGAGATTAT TGATGTTGACTTTGAGGAGAAATGAAGGTGTGCGAGTCAGATGTTATTTTCTGGATTTGACTTTGCAAACAGATGAATAATATACAGTGAATGTACTCCT ATTCATTTATTGTGTTTTCAGCTGCATTATAATAGAAGTTTGTTTTTACATTATCTGTATGGAGTGTTGATAGAGTTAGTTCAGTTGTATTTGTATGGAC TTGTAAATCTTTCTTAGTAATATGATAGCCGAGACAAGAGAGACGAAAGAGGAAGAAAATAATATAGGCAACCAAAAGACAAGTGGAAAAGAAACAGTCT GTTCTGGGTGCAAACAGTTTCTGGAGCCATATGAAGGTAGAAATGCAAAAGCAGGCAGCATCAATTTTTTTGCATCACAATCTTTCAACTTTCATGAGTT AAACGTCCTTTCTTTCCTTGAAAGACTGAATGACCATTAATTTAATTCCTCAAATTTTTTTGCTGCCAATTAGGTCCATGAAAACATCAATGGTCAGAAA CACCAAGTGAGTTTTTAGAATGACATGTTAGTCTCACGGATGAACTTGATGACCCTATGATGTTTTCAGGGGCTGAGTTTGTGGCAAAAATTTGAAGGAT TTAGTTGATGACCATCCAATCTTTCATGACCAGCATGATGTGTAGTCCCTAAAAGTAGGCTTTCAATACCAATTGACTAATTAGATATGGTTAGGAGTCA TTCATAACGTCAGTGGACCTTCCTTCAAAGTTCAGAGCAAGCTAAACTCATTCATGAGACCATTACACAAAAAGTAATATCATCTTTGAATGGTTCACGA GTGAGAAACTTTCCATGCTCACCCAAAAAAGACACCTCTAATAAGTGATGGATGTAGGTACCATAAATGACAAGCATGAAGAGAAGGACAATCCATCTCA TTGGATGATAAATATTATGGCAACTTCGTTTGTTGTCTTGATGACTCCTTCATTGTTATTGGCTGAGTTCACAATAGGGATTTTGTTATTGACAAGACTA TCTTTGACAAACTCTTTGTAACCTTGTACTCATTAAACCTACTCCAAATATTATATTTTATGATAATATTTATTTGATAGTAGCATTGTTTCGTAAGTAA TATATACATAATTTACATTGCATCTAGCAAATATAGTGGAAAAAGTCATTTGATTGTTAAAGTAAGATATGAAAATTTATATTACTTATTATCATTGAAG TAATGGTGACCTTGTATCACTAATCCACGTGTGTATACGTATACTATATATAAGAGTCTGAGGAGGAAGGGTTGAAAATCCTATGATCGGATATGGCGAG GAAGTTGATGCAAGCTGTTCACTACAATTCCTATGGTGGTGGTTCCGCATCCTTGAAGGTTTCCATCTCCTTTTTATTTCTTTATTATCCTCTTTCAATC TTTCTCAACCCACAATTCTATAACATAAATAAATACGATTTTAGGTTATTGCTTCTTCCTTCTTTCAACATAATTCAGAATCAAGACAAGCGCATCTTAA TTTAACCTTTTATAATATGATTTAGATGTTGCTCAGATTTGATTCAAAATAGTTAATTTCGAACTTATAAGCAGCATGTTGAAGTTCCTGTTCCCACTCC AAAGAAAAACGAAGTCTTGATCAAATTGGAAGCCACTTCCATCAATCCCATTGATTGGAAGATTCAGAAGGGTCTTCTCCGCGCTATATTCTTACCTCGC CACTTACCCCACATTCCTTGCACTGATGTTTCAGGAGAGATAGTAGAGGTTGGACCACAAGTCAAAAAATTCAATGTTGGCGACAAAGTCCTTGCTAAAC TCACTCATCAAGTACTTACACTCTTCTTTCACTTTCTTCAAATTCTAAGCTTCAGTAAATCTACCTTTGAATTCAAACAGATAGTTGATCCATTTTCATC TACCTTTCAATTCACTAAAGAATCTATATTTTATTGATGATTGCTATATGATATCCATTGTATGTGTTAAATTGATGATTGCAATATGATATCCATTGTA TGTGTTGTTGATGTTGAGCGACAGTATGGAGGTGGACTAGCTGAGTTTGCTGTGGCTAGTGAGAGCTTAACCGCTGGCAGGCCGATTGAAGTCTCGGCTG CTGAAGCTGCGGCCTTGCCTATTGCTGCTCTCACTGCTCATGACGCCCTCACTAAAATTGCAGGAGTGAAGCTTGATGGGAGCGGACAGCCCAAGAACAT TTTAGTAACTGCTGCCTCAGGTGGTGTAGGACACTACGCTGTTCAATTAGCAAAACTAGGGAACACACATGTGACAGCCACTTGCGGGGCTCGCAACATT CACTTTGTTAAGGGCTTAGGTGCTGATGAGGTTCTTGATTACAGGACTCCAGAGGGAGCAGCTCTAAAGAGTCCATCTGGTAGGAAATACGATGCAGTTA TCCATTGTACAACTGGAATACCTTGGTCAACATTTGATACTAATTTAAGTCAAAATGGGAAAGTAGTCGATTTGACGCCTGATCTCACTTCATTCGCGAC TTTCGCCCTTAAGAAACTTACGTTTTCCAAGAAGCAGCTGGTGCCATTTGTCGTAACTGTCAAGAGTGAGGGCCTGGAATATCTACTTCAGTTATTGAAG AATGGGAGGCTCAAGACTGTGATGGACTCTAAGTTTCCACTCACCAAAGCTGAAGATGCTTGGGCTAAGAGCATTGACGGCCATGCTACTGGAAAAATCA TTGTGGAACCATAGCCACACTTTGCTCGCAGATTATCTATCTCTACCTTATTGTACAATGTTTGTTTAAGCTCTTGCATAAAAATAACTAGGCATGTCAT ATGCTGAATGGATTTTAAGTACATATTGTGGTCACTAGATTACGTTTTTTGTCATTGAATATGGATGTTTGTTGTAAAAGTTTACATTTTTCAATATTAT TTTGGTTGATTCCATTGTTCAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_141254; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_393585
| Blastp | Quinone-oxidoreductase homolog, chloroplastic from Spinacia with 71.49% of identity |
|---|---|
| Blastx | Chloroplast envelope quinone oxidoreductase homolog from Arabidopsis with 73.25% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454401.1) |
| Pfam | Zinc-binding dehydrogenase (PF00107.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |