Ll_transcript_393598

• Id Trinity: TRINITY_DN45905_c0_g1_i13
• Name Transcript: Ll_transcript_393598
• Sequence: AAAGTTTTACCTTTTCCACGATTGACATGAGATGAAGGGAAAAGCTATCTCACGGTGACCGCAGGAATTGTCCATTGAGAGGCCACGCCTTAAATTCCCA ATTCATTCAATTAGAGACCTCTTCTTTTTCTCTCTCTCTTCGATTTCGATTTCGATTTCGATTCCAATTCCAATTCCAATTCTCCGTGTGTTGATTTTCT GAAGAAGGTCTTTGTATCGCCATGACCACCACAACTCTGCGGTGGCAACCACTGATTCCATTTTCACCGACTAATAAGAAGAACAGTAACCGTCGACATG GCCAAATGTTAACAGTAAAAGCATTCAATCGTAGAGAGATGGATAGTTTCGCACAGAGGATGGCTTCAGGGGAAGCATGGAAGGACGCATGGAGAACTGC CAACGACGGTTTCGAGCGCTTACTCTTCGAAGCTAAGAAGACCGCCGAACGCATTGACCGCCGTTACTCCGTTTCACACCGTCTCTCCTCTGTTGCTAGG TCTGCCGCTGTTAGAGCGCGTGAGATTGATCGTGACTTCGAGATTGGACTCCGTTGGCGCTCTTTCCAAATCGATTTTTCTAGAAACTGGCCTATGGTAT CTTTTTTATATATATATTTTTAAAATACTTCCTCAGATTACTATCATCGCTTTCTTTCATTTTACCTAGCTCTGTTTGGAGGACAACTATGTTATGGATG TAAGTGAATTGAGGAATTCTTACAATAATGCCCCTAACAAGCTAGCTTATAAGCTAGGCAATCTGGAAGTCTATACACTGGTAATACCTTATCTCGCATT AATAAGCTACTTGGATGCTTATAATAAGCTAGAATCTAGAAACTACAAACTACAAACTACAAACTGATTCTTCAAACTTGGTAAGTTACGTTACCTGATT CATTTCCATCTCTTTTATAAGATTAGATGATACACTGACTAATAAGTGTCAAATGACATGACAATACAAGCTTGCCTTATCAAAGACAGACTTGTAAGCT TCCCACTTATAAGCCACTTTACCAAACACCATCTGCTACCTTATTTCTTCATAATCTTATCAATTACACTCAAACTACGCAATTTATTCCCGCCATGCCA TGGCTAATGATGCCAATCTTTGTCAACAAAGTTGACGTTTTAATAATGGTATGTTATGTTTGCAGTACAGGATGCAACTCAATAAGTTCCTGAATAGTCC ACTTGGTAGGAGCTTTGCTACAATTTTCTTCATCTGGTTTGCTTTATCTGGTTGGCTATTTCGGGTTCTCATCTTTGCAACATGGGTACTTCCATTTGCT GGACCTCTTCTCATTGGCACTTTGGCCAACACCTTAGTTATTAAGGCACTTGTCCGGCTTGTCAGATGCAATTTGCTGGTTACAAGAACCAAATAATCCG ATGTACTGGTTGTGGAAACATTGTGTGGCAACCTAAAACTGATTTCTTTTCAAGAGGTGCTAAAAGCAAATCTAACTCCAAGTCAGACCCTGAGATTATT GATGTTGACTTTGAGGAGAAATGAAGGTGTGCGAGTCAGATGTTATTTTCTGGATTTGACTTTGCAAACAGATGAATAATATACAGTGAATGTACTCCTA TTCATTTATTGTGTTTTCAGCTGCATTATAATAGAAGTTTGTTTTTACATTATCTGTATGGAGTGTTGATAGAGTTAGTTCAGTTGTATTTGTATGGACT TGTAAATCTTTCTTAGTAATATGATAGCCGAGACAAGAGAGACGAAAGAGGAAGAAAATAATATAGGCAACCAAAAGACAAGTGGAAAAGAAACAGTCTG TTCTGGGTGCAAACAGTTTCTGGAGCCATATGAAGGTAGAAATGCAAAAGCAGGCAGCATCAATTTTTTTGCATCACAATCTTTCAACTTTCATGAGTTA AACGTCCTTTCTTTCCTTGAAAGACTGAATGACCATTAATTTAATTCCTCAAATTTTTTTGCTGCCAATTAGGTCCATGAAAACATCAATGGTCAGAAAC ACCAAGTGAGTTTTTAGAATGACATGTTAGTCTCACGGATGAACTTGATGACCCTATGATGTTTTCAGGGGCTGAGTTTGTGGCAAAAATTTGAAGGATT TAGTTGATGACCATCCAATCTTTCATGACCAGCATGATGTGTAGTCCCTAAAAGTAGGCTTTCAATACCAATTGACTAATTAGATATGGTTAGGAGTCAT TCATAACGTCAGTGGACCTTCCTTCAAAGTTCAGAGCAAGCTAAACTCATTCATGAGACCATTACACAAAAAGTAATATCATCTTTGAATGGTTCACGAG TGAGAAACTTTCCATGCTCACCCAAAAAAAGACACCTCTAATAAGTGATGGATGTAGGTACCATAAATGACAAGCATGAAGAGAAGGACAATCCATCTCA TTGGATGATAAATATTATGGCAACTTCGTTTGTTGTCTTGATGACTCCTTCATTGTTATTGGCTGAGTTCACAATAGGGATTTTGTTATTGACAAGACTA TCTTTGACAAACTCTTTGTAACCTTGTACTCATTAAACCTACTCCAAATATTATATTTTATGATAATATTTATTTGATAGTAGCATTGTTTCGTAAGTAA TATATACATAATTTACATTGCATCTAGCAAATATAGTGGAAAAAGTCATTTGATTGTTAAAGTAAGATATGAAAATTTATATTACTTATTATCATTGAAG TAATGGTGACCTTGTATCACTAATCCACGTGTGTATACGTATACTATATATAAGAGTCTGAGGAGGAAGGGTTGAAAATCCTATGATCGGATATGGCGAG GAAGTTGATGCAAGCTGTTCACTACAATTCCTATGGTGGTGGTTCCGCATCCTTGAAGCATGTTGAAGTTCCTGTTCCCACTCCAAAGAAAAACGAAGTC TTGATCAAATTGGAAGCCACTTCCATCAATCCCATTGATTGGAAGATTCAGAAGGGTCTTCTCCGCGCTATATTCTTACCTCGCCACTTACCCCACATTC CTTGCACTGATGTTTCAGGAGAGATAGTAGAGGTTGGACCACAAGTCAAAAAATTCAATGTTGGCGACAAAGTCCTTGCTAAACTCACTCATCAAGTACT TACACTCTTCTTTCACTTTCTTCAAATTCTAAGCTTCAGTAAATCTACCTTTGAATTCAAACAGATAGTTGATCCATTTTCATCTACCTTTCAATTCACT AAAGAATCTATATTTTATTGATGATTGCTATATGATATCCATTGTATGTGTTAAATTGATGATTGCAATATGATATCCATTGTATGTGTTGTTGATGTTG AGCGACAGTATGGAGGTGGACTAGCTGAGTTTGCTGTGGCTAGTGAGAGCTTAACCGCTGGCAGGCCGATTGAAGTCTCGGCTGCTGAAGCTGCGGCCTT GCCTATTGCTGCTCTCACTGCTCATGACGCCCTCACTAAAATTGCAGGAGTGAAGCTTGATGGGAGCGGACAGCCCAAGAACATTTTAGTAACTGCTGCC TCAGGTGGTGTAGGACACTACGCTGTTCAATTAGCAAAACTAGGGAACACACATGTGACAGCCACTTGCGGGGCTCGCAACATTCACTTTGTTAAGGGCT TAGGTGCTGATGAGGTTCTTGATTACAGGACTCCAGAGGGAGCAGCTCTAAAGAGTCCATCTGGTAGGAAATACGATGCAGTTATCCATTGTACAACTGG AATACCTTGGTCAACATTTGATACTAATTTAAGTCAAAATGGGAAAGTAGTCGATTTGACGCCTGATCTCACTTCATTCGCGACTTTCGCCCTTAAGAAA CTTACGTTTTCCAAGAAGCAGCTGGTGCCATTTGTCGTAACTGTCAAGAGTGAGGGCCTGGAATATCTACTTCAGTTATTGAAGAATGGGAGGCTCAAGA CTGTGATGGACTCTAAGTTTCCACTCACCAAAGCTGAAGATGCTTGGGCTAAGAGCATTGACGGCCATGCTACTGGAAAAATCATTGTGGAACCATAGCC ACACTTTGCTCGCAGATTATCTATCTCTACCTTATTGTACAATGTTTGTTTAAGCTCTTGCATAAAAATAACTAGGCATGTCATATGCTGAATGGATTTT AAGTACATATTGTGGTCACTAGATTACGTTTTTTGTCATTGAATATGGATGTTTGTTGTAAAAGTTTACATTTTTCAATATTATTTTGGTTGATTCCATT GTTCAAAAA
• Tissue: pods
• Gene name: LI_gene_141254;
• Additional information: details;

Expression of Ll_transcript_393598

FPKM

• PAB: 1.5
• PNAB: 1.1
• PS1: 1.4
• PS2: 0.8
• PS3: 1.6
• PW1: 0.8
• PW2: 1.5
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_393598

• Blastp: Quinone-oxidoreductase homolog, chloroplastic from Spinacia with 71.49% of identity
• Blastx: Chloroplast envelope quinone oxidoreductase homolog from Arabidopsis with 73.25% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_014496485.1)
• Pfam: Zinc-binding dehydrogenase (PF00107.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;