| Id Trinity | TRINITY_DN45905_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_393589 |
| Sequence | ATGGGTACTTCCATTTGCTGGACCTCTTCTCATTGGCACTTTGGCCAACACCTTAGTTATTAAGGTATGTATACTTGCCTATTCCATTTCAACATCTTTT TATACTTCAAATGGTACTCCACTACCAATATTAAATGTTTATAAACCGAAGTATTTTTTGCACTCCTTTTGAACATACAATTGAGTCCGAATATTTTCAA AATTCAAACATTGGTACAAAAAGATCTTAATTTTTATCCCCCCCCCCCCCTAGAAAAATATCCCTTGAAGAAAGGAAACAAGAGAAACAATAAACAACAA GGATGAGAACTCTTCTTTAGAAAAGCAGATATGTAATAAGGATATGAAATTCACTAAAATGATAACACCCGATTGAGGCCATCAACAGATGTATTAGAAA TGATCCATTGGGATTGATTTTAAGCTAAGCAAATTGCTTGAAGAACAGAGGGTTGTGTTTGATGTAAGAGCTGGAATCCACATATTAAGTGGATTTCTTA AAAGTTTTCACGTTTATTTATGGCGTAGAACAACTTGAAGTATGGTGTAAGCTTATTGATACTTCAAATAGAGGAAGTAAGCTTATAAGCTGGGGTTCCT TTATCTTGTCAATTTCTCATAGAGGAAGTAAGGTAATCAGGTAGTATATTATTTGTATAGATCTAAATGCTACAGAACCTTTCTATTACTTATATTTGAA ACTTCAAAATTTGCCAGACATTTAGTTTGGGGCTACCTATCTAAATTAGTTTTTTGTTAGACATAACCGTGGCGTGAAGATAGGAAGCTTGGATACAAAC ACGAGACATATGTAGAGACATGAAACTAACACATGAATACTGAATATTATAAACTTTTAAAAGTTATTGACTTTGCTAACGTTATGACATAAAGTGTACA TAATATTAAAACATGTATCCTAAATTAGAATAGATATCAATGCATCATAACTCATAAGGAAACATTAGTGATTGTATGTACAATAAAATACTAACGTTTA TCTAACATATGAATACTGAATAAGTGAATATTATAAACTTTTAAAAGTTATTGACGTTGCTAAAGCTATGACATAAAGTTTACATAATATTAAAACATGT ACAATAAAATACTAACGTTTATCTAATTATTGTGATACACCACTTGTATTGGCATACAATTTCAGAAAGTAATTTGAAGATGTAGGTTAGAAGTATCCGA CACAGGTACATTCTTACATAGGGATGACAACCATTTTGAAGTGCAAATGCTTCACGGATGTGAAGCTTGGCTAGCATATTCAGATGCAAGTTCCCTGGAT TGAACTCTGGATATGTTTTCTTACTGTAGTAGTGTAGTGTATAGCTCGAGTATCTCTTGCATTTTAGTTCATGATCTTTTGAATTTATCATTTAAGCTTA TCTGCACTGTTTGTATTAAAATTGGCTAAAAAAGTGTACTACATTTATAACTGTATAGGGCACTTGTCCGGCTTGTCAGATGCAATTTGCTGGTTACAAG AACCAAATAATCCGATGTACTGGTTGTGGAAACATTGTGTGGCAACCTAAAACTGATTTCTTTTCAAGAGGTGCTAAAAGCAAATCTAACTCCAAGTCAG ACCCTGAGATTATTGATGTTGACTTTGAGGAGAAATGAAGGTGTGCGAGTCAGATGTTATTTTCTGGATTTGACTTTGCAAACAGATGAATAATATACAG TGAATGTACTCCTATTCATTTATTGTGTTTTCAGCTGCATTATAATAGAAGTTTGTTTTTACATTATCTGTATGGAGTGTTGATAGAGTTAGTTCAGTTG TATTTGTATGGACTTGTAAATCTTTCTTAGTAATATGATAGCCGAGACAAGAGAGACGAAAGAGGAAGAAAATAATATAGGCAACCAAAAGACAAGTGGA AAAGAAACAGTCTGTTCTGGGTGCAAACAGTTTCTGGAGCCATATGAAGGTAGAAATGCAAAAGCAGGCAGCATCAATTTTTTTGCATCACAATCTTTCA ACTTTCATGAGTTAAACGTCCTTTCTTTCCTTGAAAGACTGAATGACCATTAATTTAATTCCTCAAATTTTTTTGCTGCCAATTAGGTCCATGAAAACAT CAATGGTCAGAAACACCAAGTGAGTTTTTAGAATGACATGTTAGTCTCACGGATGAACTTGATGACCCTATGATGTTTTCAGGGGCTGAGTTTGTGGCAA AAATTTGAAGGATTTAGTTGATGACCATCCAATCTTTCATGACCAGCATGATGTGTAGTCCCTAAAAGTAGGCTTTCAATACCAATTGACTAATTAGATA TGGTTAGGAGTCATTCATAACGTCAGTGGACCTTCCTTCAAAGTTCAGAGCAAGCTAAACTCATTCATGAGACCATTACACAAAAAGTAATATCATCTTT GAATGGTTCACGAGTGAGAAACTTTCCATGCTCACCCAAAAAAGACACCTCTAATAAGTGATGGATGTAGGTACCATAAATGACAAGCATGAAGAGAAGG ACAATCCATCTCATTGGATGATAAATATTATGGCAACTTCGTTTGTTGTCTTGATGACTCCTTCATTGTTATTGGCTGAGTTCACAATAGGGATTTTGTT ATTGACAAGACTATCTTTGACAAACTCTTTGTAACCTTGTACTCATTAAACCTACTCCAAATATTATATTTTATGATAATATTTATTTGATAGTAGCATT GTTTCGTAAGTAATATATACATAATTTACATTGCATCTAGCAAATATAGTGGAAAAAGTCATTTGATTGTTAAAGTAAGATATGAAAATTTATATTACTT ATTATCATTGAAGTAATGGTGACCTTGTATCACTAATCCACGTGTGTATACGTATACTATATATAAGAGTCTGAGGAGGAAGGGTTGAAAATCCTATGAT CGGATATGGCGAGGAAGTTGATGCAAGCTGTTCACTACAATTCCTATGGTGGTGGTTCCGCATCCTTGAAGGTTTCCATCTCCTTTTTATTTCTTTATTA TCCTCTTTCAATCTTTCTCAACCCACAATTCTATAACATAAATAAATACGATTTTAGGTTATTGCTTCTTCCTTCTTTCAACATAATTCAGAATCAAGAC AAGCGCATCTTAATTTAACCTTTTATAATATGATTTAGATGTTGCTCAGATTTGATTCAAAATAGTTAATTTCGAACTTATAAGCAGCATGTTGAAGTTC CTGTTCCCACTCCAAAGAAAAACGAAGTCTTGATCAAATTGGAAGCCACTTCCATCAATCCCATTGATTGGAAGATTCAGAAGGGTCTTCTCCGCGCTAT ATTCTTACCTCGCCACTTACCCCACATTCCTTGCACTGATGTTTCAGGAGAGATAGTAGAGGTTGGACCACAAGTCAAAAAATTCAATGTTGGCGACAAA GTCCTTGCTAAACTCACTCATCAAGTACTTACACTCTTCTTTCACTTTCTTCAAATTCTAAGCTTCAGTAAATCTACCTTTGAATTCAAACAGATAGTTG ATCCATTTTCATCTACCTTTCAATTCACTAAAGAATCTATATTTTATTGATGATTGCTATATGATATCCATTGTATGTGTTAAATTGATGATTGCAATAT GATATCCATTGTATGTGTTGTTGATGTTGAGCGACAGTATGGAGGTGGACTAGCTGAGTTTGCTGTGGCTAGTGAGAGCTTAACCGCTGGCAGGCCGATT GAAGTCTCGGCTGCTGAAGCTGCGGCCTTGCCTATTGCTGCTCTCACTGCTCATGACGCCCTCACTAAAATTGCAGGAGTGAAGCTTGATGGGAGCGGAC AGCCCAAGAACATTTTAGTAACTGCTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_141254; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_393589
| Blastp | - |
|---|---|
| Blastx | Chloroplast envelope quinone oxidoreductase homolog from Arabidopsis with 68.35% of identity |
| Eggnog | alcohol dehydrogenase(COG0604) |
| Kegg | Link to kegg annotations (AT4G13010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454401.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |