| Id Trinity | TRINITY_DN45909_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_392358 |
| Sequence | CAACGGACAAACAGCGCAAATCATAATCAACAGCTACGTCGATTCTCTCATATTTAGATTTATCATTAATTCAAACCATTAACTAATGAAAATTCTACCG GTTGAAGACAATTTTGAGTTTCACAGGATGTTTTTGTCATTAGGGATTTAAGTTGTTTACAAAGATAAGCAGAGGAGGTCATTACATTATTATCTCCAAA ACTCGAAAACTCTTACGCCTGTTGGATGTAATTTCGCTAAAACTCGGGGTTATGTGACATAATTGCATTCGATGCTCTGCAATCTCACCCTCTCACTTCA CTCTACAGAAACTCCGATTTAACATCATGAGCAACGGAGGAAGAGCTGCATCCGACGACTTCGGCCGAGCTGTGTCCAACCTTGCGGTGGCTCAGCTCTG CCAATCCGCCGGATTCCACGCCGTCAACAACTCCGCCCTCGATGCATTCGCTGACGTCACAATCCGTTACCTTCTCCAGTTAGGTAAAACGGCACAGTTT TATGCTAACCTCTCTGGTAGATCACATTGCACAGTATTCGATTTGATCCTAGGGTTACAAGATTTGGAATCACCTCTAGGGTTTCCAAATCAACTACAAC AATGCATCGTTAGTGAGCTCGTTAATTACGTTAATTTAGTTGATAACGAGGTTCCATTTGATAAACCAATACCGCGGTTTCCGATTATTGGGTACCGGAG AAACTTACCGAGTTTTTCGCAATTAGGTGAGACACCAGCCTCTAAGCATATACCTAACTGGTTGCCTGCTTTGCCTGATCCTCATACTTATATTTACACC CCTGTTTGGAATGAGAGGGTTTCCGATCCGAGAGAGGATAAGATCGAACAGGCGAGGCAGCGTAGGAAGGCCGAAAGGTCTTTGTTGAGTTTGCAGAAGA GGTTATTGAGTTGTAGTAATGGTTCAGTAGAAAGTAGTAGTATTGTTGCTGAAGATGCTTCAAAAGGACAATGCCATGAAGTGATTGTTGATAACAACTC ATTGCAGGAGAGTAGTAAAGAGGTTTCTCCTGTGGTTGCAGTTCTTTGTAAGCTTTCGGATGAAGCCGTGGATGTGAAAGGTGGCGTTTCTGTGTTGGAG GTGTTTGCTCCTGCATTTGAGAGATTGAAAGGTGACGTTTTATGTGATGATGGTGAGGAAGGGAAAAATGATCTTCCTGCTGTGAGGCCTACTGTACATT TTAAGTTTAGAGCTGTGAAGAAGTTTATTGGCGAGTCATTGGATACTAGACATCAGAATAAGGGTGCTTTGAGAACAGCGTCTTTGGCTGGACGAGAAGA CGAGAGAGATGATAAGAAGAGGAGAGCTGAGTACATTCTCAAACTGTCTATGGAAAATACAGAAGAACTGACTCTGTTGTAGACTTATAGATTAGTTTCT TAACTGGCTTTGCTGAATGAATGCATACTGGATTTTGCTAATTCATTGTTTATATGAATGAGTTTGTTATTGATTAATGGTCTAGGGATCAGGGTTAGGT AGGTTTAATCCCAATTTGCTAGCTGAATGTGAGGATTTTGTTTAACTTTCTAAACACTCTTTCCATTACTTCTTAGCTTGTGGGATGAGAATAGGATATA ACAAGTTCTTGCCAAACTATCAACAACCATGAATGCATTTAGTACCACAACTAGCCTTCAGTAGCATTATGGACAACTACACAAGACCAACACTGATTCG TGCAAGCTATTATAGGAGGCAATTTCAACAGCTTTGAGCAATCATCACTCAGCTTCCGGTGTGGTTTTGCTTCTCAAAATGATATCTCATTTTCAGTATG GTAACAAACTTCAAAAAGGCATGCCTTGCCACACCTGCTTAGGCAAACAAGTCATGGTTGTAGCCTTCTGAGAAAGGTTTTATAAGAACCATGGATTCTT CTCACCAAAGGAGAAGAATGAAAAGCAAAGAATGAGAGAAACAGTAGAATAAGAGTGAATACTTTTATTGAATTATGAATTGATGATTATACAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_141263; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_392358
| Blastp | Transcription initiation factor TFIID subunit 8 from Arabidopsis with 43.05% of identity |
|---|---|
| Blastx | Transcription initiation factor TFIID subunit 8 from Arabidopsis with 42.42% of identity |
| Eggnog | TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor(ENOG410ZS4D) |
| Kegg | Link to kegg annotations (AT4G34340) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414738.1) |
| Pfam | Bromodomain associated (PF07524.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |