| Id Trinity | TRINITY_DN45916_c2_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_393220 |
| Sequence | TTTAAATCCTTTTCTTATGCCCACTTTGTTTTTTATGTTGATTTAGATTTCCAATACTAAGTTGCTTTATTTTTATTCCTTAGTGGTCTGTGTTTTGCTT GGAATGAAAGAAAATGAAAGACTTGATAACCATGAAATACTTTGGTGGAACTAGTGGTGTAAGTTCCCGCTAGATCCCAGAACGACCAAAAGTTAAAGTT TTGATTTCTCGGAGCGACACTTGTTGAGAGAGACATCATGTATCCCGAAAGAGATTAGTTTCTTAGCTAAAAGGGAGGAGGTGCTAAAAAGGCAAAGAGT GTTCCTCAGAGATTCTTGTCAGCAACATTTGCCGATTTACCTGCACCTGATTGGCATTGGGAGAAGATGCCATCTGCTCCGGTACCTCGGCTAGATGGGT ATGCTATACAGATTAACAATCTCTTTTATGTGTTCGCAGGATATGGCTCTCTTGATTATGTGCATTCTCATGTTGATATCTTCAATTTCAGCAGTAACAC ATGGGTAGAGAGGGTTGATATGCCAAAAGATATGGCTCATTCACATTTAGGAGTGGCAACCGATGGGAGGTTCATATATGTGGTCTCGGGTCAATATGGT CCGCAATGCAGGGGGCCTATCGCTCGTGTGTTTGTGTTGGACACCAAAACAAAAAAATGGAATAGTTTGCCGCCATTGCCATCCCCCAGGTACGCTCCTG CAACTCAATTATGGAGGGGTAGACTCCATGTCATGGGTGGTAGCAAGGAGAATCGTCATACACCTGGGTTAGATCATTGGAGTCTGGCTGTAAAGGATGG TGAAGCTTTGGAGAAACAATGGCGGACCGAAATTCCCATTCCACGAGGTGGACCACATAGGGCTTGCATTGTCGTCAATGATCGACTTCTTGTTATTGGT GGGCAAGAGGGTGATTTTATGGCAAAACCGGGTTCACCTATATTCAAGTGTTCACGGAGGCTTGAGGTGGTCTATGATGATGTATATATGTTGGATGATG AAATGAAATGGAAAGTTTTGCCACCTATGCCGAAACCAAACTCTCATATTGAGTGTGCATGGGTAATCGTCAACAATTCAATTATTATCACCGGCGGAAC AACGGAAAAGCACCCAATTACAAAAAGGATGATGCTAGTTGGAGAAGTCTTCCAATTTAATTTAGACTCTATGACATGGTCAGTGATCGGAAAGCTTCCT TACCGTGTGAAAACCACATTAGCCGGTTTCTGGGATGGATGGCTGTACTTCACATCGGGACAACGAGACAGAGGACCAGATAATCCGCAGCCAAGAAAGG TCATCGCGGATATGTGGAGAACGAAGTTAAGTTTGCAATGATTCAAGATAAGCAAATGTGCAACATGTCACACTTTCATTAATTTTTTGGTTCATGATTG CAACAACAGGTTTAGTTTGAATTATTTCTCTCCAATGCTTTCATTTGGTAATACAGATTCAAGCTATGCAGATATTTATCTTTTTAACCAAATGCTTGAA CAAATGGTTGTATATATAACAATTAACAGAGATATTTATAGATATTGGAAATTGAAGTCAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_141298; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_393220
| Blastp | Kelch repeat-containing protein At3g27220 from Arabidopsis with 74.3% of identity |
|---|---|
| Blastx | Kelch repeat-containing protein At3g27220 from Arabidopsis with 73.98% of identity |
| Eggnog | Kelch repeat-containing F-box family protein(ENOG4110X8D) |
| Kegg | Link to kegg annotations (AT3G27220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447440.1) |
| Pfam | Galactose oxidase, central domain (PF13418.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |