| Id Trinity | TRINITY_DN45916_c2_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_393216 |
| Sequence | GCCCAACTATTTTTCTCTCTAAACTTCTCTCTTTCTCGTTCCTCTTTCTTTCTTTCTTCTCCAAAAAACTTCCCAATATATATAAAATGCATAACTTTCT CATTTCATTCTTTCTTCACTATACTCAAATTCAACAATGGCCAGGTTCCACCAAACCCACTTTTCTACAACCAAACTTCTCATCTTTTTCTTCTTCTTTT CTATTCTCTGTCTTGTTCTCATTGCAAATATCTTCTGGGCTTCTTTTTCTTCTTTGAATCTTTCAATTTCTTCTAATTGGGTTCATTACAAATCACCCAT TATGCTTTTACCAAATCTCACTACTACTACTACCACCACCCATTATAGTGGAGGAGGTGCTAAAAAGGCAAAGAGTGTTCCTCAGAGATTCTTGTCAGCA ACATTTGCCGATTTACCTGCACCTGATTGGCATTGGGAGAAGATGCCATCTGCTCCGGTACCTCGGCTAGATGGGTATGCTATACAGATTAACAATCTCT TTTATGTGTTCGCAGGATATGGCTCTCTTGATTATGTGCATTCTCATGTTGATATCTTCAATTTCAGCAGTAACACATGGGTAGAGAGGGTTGATATGCC AAAAGATATGGCTCATTCACATTTAGGAGTGGCAACCGATGGGAGGTTCATATATGTGGTCTCGGGTCAATATGGTCCGCAATGCAGGGGGCCTATCGCT CGTGTGTTTGTGTTGGACACCAAAACAAAAAAATGGAATAGTTTGCCGCCATTGCCATCCCCCAGGTACGCTCCTGCAACTCAATTATGGAGGGGTAGAC TCCATGTCATGGGTGGTAGCAAGGAGAATCGTCATACACCTGGGTTAGATCATTGGAGTCTGGCTGTAAAGGATGGTGAAGCTTTGGAGAAACAATGGCG GACCGAAATTCCCATTCCACGAGGTGGACCACATAGGGCTTGCATTGTCGTCAATGATCGACTTCTTGTTATTGGTGGGCAAGAGGGTGATTTTATGGCA AAACCGGGTTCACCTATATTCAAGTGTTCACGGAGGCTTGAGGTATCGTTTTCTTTAGTCATCGACAACATTCACTATTTACTGTCATATATTGTCATCA TGGTTGGTTCTAAAGATATGGTTTGAGAAATAGAATTTACTAGTGCGCCGTAGATATTCTCTTGCACACTTACCCCTCTTTCTTCATGCTTAATATGTTG AGACTGTGACCGTCATTGGATGCGTCAATATTATTTTTTTCTTGTGAAACCTTGTGGTGTTTTCTAGCCTTAAATCTCTTATGTTTCAGGTGGTCTATGA TGATGTATATATGTTGGATGATGAAATGAAATGGAAAGTTTTGCCACCTATGCCGAAACCAAACTCTCATATTGAGTGTGCATGGGTAATCGTCAACAAT TCAATTATTATCACCGGCGGAACAACGGAAAAGCACCCAATTACAAAAAGGATGATGCTAGTTGGAGAAGTCTTCCAATTTAATTTAGACTCTATGGTAC TCCTTTTCTCCTTAGAAATAGGGTTGTGCATATCTTTTTATCTATTAAAATACCTCGCTTTGTTTATCGGCTGTTGCAATTCATGAGCAACACACAATAG TCGTCAAGTTTGTGTTAGACAAGTATCTGTATTGGACACTCCTAACCATATTCTATATCATTTTGTTGCATCCCTGTGGTTCATGTTGTATCCGTGTCCT GGGTTGTGTCCATGCATCCTTATTGCCGCTCATAGGGTCCTGCCTCGCTCGAATAGGACTGCCTCTATGGAGGATACCTGCGGTTGAAACCAAAAAATGT TGACATATTAATGGCTACCTACTAGCTTCACTGACATGGTTTATTAAGAAAATCCTTTGACAGTGTTATGTTACCCTGTTAGTGTACTGAATGCTGTTCG ACTACTATCGTCTGACGTCGAGTTGGATTTTGTCATTCACAGTCAATGACGGATTTTGTCTATATATCCGGTGCCCCCTCTGATGTTTTATGGATCGGTC ATTCTTCACAACGAAAGTTTGGTGTCCTAATTAATTCATCAAAGTTATGGAATGCCAGTTTGAAACATTTTATCCGTAACTAATAATGATTGCTAATAAT CCTGTTAATGGTTGGTTGCAGACATGGTCAGTGATCGGAAAGCTTCCTTACCGTGTGAAAACCACATTAGCCGGTTTCTGGGATGGATGGCTGTACTTCA CATCGGGACAACGAGACAGAGGACCAGATAATCCGCAGCCAAGAAAGGTCATCGCGGATATGTGGAGAACGAAGTTAAGTTTGCAATGATTCAAGATAAG CAAATGTGCAACATGTCACACTTTCATTAATTTTTTGGTTCATGATTGCAACAACAGGTTTAGTTTGAATTATTTCTCTCCAATGCTTTCATTTGGTAAT ACAGATTCAAGCTATGCAGATATTTATCTTTTTAACCAAATGCTTGAACAAATGGTTGTATATATAACAATTAACAGAGATATTTATAGATATTGGAAAT TGAAGTCAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_141298; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_393216
| Blastp | Kelch repeat-containing protein At3g27220 from Arabidopsis with 60.68% of identity |
|---|---|
| Blastx | Kelch repeat-containing protein At3g27220 from Arabidopsis with 74.09% of identity |
| Eggnog | Kelch repeat-containing F-box family protein(ENOG4110X8D) |
| Kegg | Link to kegg annotations (AT3G27220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447444.1) |
| Pfam | Galactose oxidase, central domain (PF13418.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |