| Id Trinity | TRINITY_DN45916_c3_g6_i7 |
|---|---|
| Name Transcript | Ll_transcript_393256 |
| Sequence | AGAAGCCCAAGATTGAAGATTAAAGAGAAAAAGAAAAGGGCGGGTGGCGTGTTCATTCGAACTCACTAACTCACCGCTTCTCGTGGCGGCTTCTCTCAAC AGTTCTTGACTCATCACTCTTCTTCTCCTCATTCTTCTTCTTCTCATTCTTCTTCTTCTTCTTCTTATTATTATTCTTATTATTCTTATTTGATTCATGT CTACTTCCGGCGAGGATCACCGTCCACATCAATTCAAATTTGAACTGTTAAATCCTCATTCTCACGCTCAAAATAATCCTATTCCAATTTTCTCTCCCCT TCACCTTCATCCTCATTTATCACCCCTCTCCTTGAGCCAAAAATATGAAGTCAGTAATTTCATGCCTCAGACAAGTACTACGACTGAAACATCTCCTGCC TCGAGGAGAACAGTGAATATTCCTCCTCCGCGTCAAACTGAACCTGTCATCGGAGGAAAGCATCAAAATAAGTCCAAACTTTCGAGAAAATCTGGGATTA ACAAATCGATTATCGAATCTCCTAATTTGGCTGCAGTTAACAATTGTCGTTATGACAGTTCCTTAGGATTGTTGACGAAGAAATTTGTCAGCTTGATCCA TGAGGCTAAGGATGCTACCTTGGATCTAAATAAATCCACCGAGATCTTGCAGGTCCAAAAAAGGAGGATTTATGACATTACAAATGTTCTTGAAGGAATA GGATTGATTGAGAAAACTTCAAAGAACCATATACGGTGGAAGGCATATGACGGATTCGGGCAACGCGATCTGGATGATCAAGTTACTAGACTGAAGGCTG AGGTTGAAAGTCTATATGCCGAGGAATACAGCCTTGATGAATGTATAAGGAAAAATCAAGAGCTTCTAAGAAACCTGCAGAAAAGAAAAAACTCTCAAAA ATACCTCTTTGTTACCAAGGAAGATATTCTTAGCCTTCCATGCTTCCAGGATCAAGAACTTATTGCAATCAAGGCTCCACAAGCTAGCTTCATTGAGGTC CCTGATCCAGACGAGGAATTTGGTTTCCGACAAAAGCAGTACAAAATGACTGTTAGAAGTGCAACTGGACCTATATCTTTGCACCTCTTGAGAAGCAAGC GGAAAAGCAATTTTAAGGATGGCAGTATCAAGCAGGTTCAATTAATAGATCAATCATGGAATAGTGACCACTGCAGAATGAGGAGCTTGGGGCTATTAGA GAGCCAGGATGATCAGCAAAATGCTCCTCAAAGTTACGAATCTTTGAGCTCAGAGGAATTTGAAATTCAAGAAATTACTCCCCGGGATTGTGAAACCGAT GATGACTATTGGTTTCAAACAGATCCTGAAGTGAGCCTAACAGATTTGTGGGGTGGCAGTAACTTCTAACCAATCTTCATAATATGAATTTGATTCTTTG ATATTACCTCAATATTGGAGGCAAGTTGGGTGGTTTGAAGGCTCCTGGTTTATAAATGTTTTTTCCCCTCTTTAGCAAATGAGAAGTTAGTTGAGATAGA TTAGCTTCTTGTAGATGATTAACACAATAGGGGTATGAGGTTTTTGCTAAAAAACAAGCATCATTGACTGATATGATCAAACATGTAAATGAGATAGGAT GACCAACTTGGCAAGTACAAATAAGCAGATCAAAGAGATAGGCATTGGAAATGTATATCATAGCATATTCTTATGACAGTAATAATTGTGCCTTCTGGTG CAGTGAATGTGATTCTACTAATGTGCAACAATATAGTTGCAGATATCTGTCATTTATGACCAAATCAGTATCCTAGGCCCATGAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_141304; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_393256
| Blastp | Transcription factor E2FC from Arabidopsis with 42.4% of identity |
|---|---|
| Blastx | Transcription factor E2FC from Arabidopsis with 48.93% of identity |
| Eggnog | E2F transcription factor(ENOG410XNYI) |
| Kegg | Link to kegg annotations (AT1G47870) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416195.1) |
| Pfam | E2F/DP family winged-helix DNA-binding domain (PF02319.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |