Ll_transcript_393488

• Id Trinity: TRINITY_DN45928_c8_g1_i10
• Name Transcript: Ll_transcript_393488
• Sequence: CCAAATTTGAATATATATATTTCTGGTTTATTTAATAATAGAATTACCGTTCAGCCCTTTCCTCGCACTATTAGAGTAGGGCAAAATCATTTCAAATTTT AGGAAATTCCAATTCCAGGGTCCCTTCAATGTCAGCGATTCCCAAAACTGAGAAAAACGGCATCGCCGTCGTCGATATTGATGTCGACGACGGCGTAGAC CCCACCGCAGTTTCTTCGGAAGTTGCGCCACAAGTTCAGAACCTTGATTCTCGAAGTTTCTGGAAGGCTGGAGATTACATTGCTGGTTCATCTTCCAAAC CTGCTTCATTTCAAGGTCACTTGGATCATGCTCGTGTTCATCCCAAGTTTCTGCATACCAATGCAACTTCCCATAAGTGGGCTTTTGGAGCAATTGCTGA GCTAGTCGATAATGCTGTTGATGAGATTCAAAATGGTGCAACTTTTGTAAAGGTGGATAGGGTTGATATCATGAAGGATAATTCACCAGCATTATCTTTC TTAGATGATGGTGGTGGAATGAGTCCTGAATCACTACGGAAATGCATGAGCTTGGGTTATTCCTCAAAGAAGTCAAAGACAACAATTGGACAGTATGGTA ATGGATTCAAGACTAGTACAATGAGATTGGGTGCTGATGCCATTGTTTTCAGCCGGGCAACATGCTCAGGCCGGGCAACACAAAGTGTGGGTCTGCTGTC CTATACCTTTTTGCGGAGAACGGGGCAAGATGACGTGATTGTTCCAATGATAGATTTTGATATATCCAGCCATTGGGCAGAGCCAATCATCTATGGCTCA CAAGACGATTGGTCAGCCCACTTGAAAACAATTCTTGAATGGTCTCCCTTCACATCCAAGGAAGAGCTTATGCTTCAGTTTGATGATATAGGATTACATG GGACCAAAGTTATAATATACAATTTGTGGTTGAATGATGAAGGGATATATGAGTTGAGTTTTGACGATGATGCTGAGGATATCAGGCTGAGAGATGAGGC CAGTCAAGGAGAAGTGAAAAAGTTACACAAAAAAACTGTTCAGCTACAGTCACATATTTCCTACCGCATGCGTTATTCCTTGAGGGTATATCTTTCAATG TTGTACCTCAGAAAATTTTCTAATTTCCAAATCATACTAAGGGGAAAACCCGTGGATCAGTTTAACATTGCAGATGAGTTAAAATATTCTCAAATAGTGT CGTACAAGCCCCAGTTTGCCATTGGATCCAATGAGGCTACTGTGTTGACAACCATTGGATTTATAAAGGAGGCTCCTTCTCTAAATGTTTCTGGATTCAA TGTGTACCACAAAAATCGCCTAATTAAGCCTTTTTGGAAAGTAAATGCAGATGGCTCATCAAAAGGGATGGGTGTTGTCGGAGTTCTTGAAGCCAACTTT ATAGAACCAGCACATGACAAGCAGGATTTTGAGAATTCATTGTTGTTCATACGGCTGGAGACCAGGCTAAAACAAATGACAAATGATTACTGGTTTGTTA CGTTATATGACATTGTTTATCATGTACATTTTTCTTTTGTTTTGTTCCATAAGTATATTTTTCAGTGTCTACTAAGGTTGTACCCACGCTTCTGTTTGAA TTTCATTAAATGTTGCATTTGATATTGCTTAATGCTTCCTTAATAGTGTATTGTAAAGTTCTTGTCCATTTATATTTTCTTTACTCACTTATTCGCTTGC TCCCTTCAATTTTGGCAAAACAATTTACTAGGTTTTGATAAATCATGGAACTTTATATTTTAGATTTTGTTCTTGAAGCTTTTGTTAGTTCAGGCTACAA CTTTTATAGAAGTTAAAAACGTTAGCCAAATGCTGTATTCATTTCATGATTGGCTAGCTACTTATCTTTAAAACAGGGCTCTTGGGAGTTTGTATTGGTC TGAAAAGAATGTGGTGGGATAAGTTGGCCAGGAAAGTAGATTATATTTGCCATTGTAGAAGTAGACTTTACTTGGTTTAGAAATGGAGTATTGTAGATAG TTGGAGAATATTCCGGTTATTACTTATTCGGCTATTAGTCTTATGTTAGTGGGCTTGGCCTTGTACTAGTAGTGCTATTACTTGACCTAAGTACGTAACT GTTGGTATGAAAAACAGGGCATTAAGATAATGTTTTGCGTCAAATTCATATCAATAATATTATTAAGTCTTTTCTCCCCTTTTCTCTTCCTAAAACAAAC CTATAATTCTTCAACACAATATTAGACAGGTACCACCCCTTTCTCCCAATTTTGCCCTTATTTTACGAATCAATTACCAATAGAGATGTTTTTAGTATCT AGAGATAAAGGGCATATTAGGGAAAACAATAAATCTAATGTAATTCAATGGAGAGAGTACACTATTGTTCTACTTGGACAATAAGTGTGTGACCGCTAGA GCAATGGGTTTGCAATGTGTAACAAGTTAAAGCTTCGTAGCTTAAGCTTAATAGCTTAAAAGGGAGGGTCCAAGAATATTAGGTTTTTGTCGCTGGGCTT GGGTTTGTACTATTAGAATTCTTAAGTCATAGAGAATAGAGAGAGAGAGAGAATAGAGAAGAAGAGTAACTGAATATGTTATTGTATTCAATTAAATCAC TATCTATAGAAAGTGACTTGTGCATTGGTCCTATGGTGGCAATTGTCATAATGACAACTGCCAAAGCTAACCTACTCTAGCAGGTAATCTACTTGTACTA ATTGATAACAACCTGGACTAACAAGTCATGACTGAAAGACCATATTACTGTAACATATCACCCTGAATCTGATGGGGGTTAGGGTTTGGTGTTGGGAAGT AAATCCCACATCGCCTACCTCATTGTCTCAAGAATGATTTAAATATTTGTTGGGTTACCTCTCATTGCCAATTGGTTTGAGATGGAACCTTAACATGATA TCATAGCTAGAGCCTCAAATTCTGCCATTGCGACCTCCCCTGCCTCAAATTCTGCCAAATTGCTATGCTGACCACCGTAGCTAGGATGCTGACCACCGAA GCCATTGTTCTGACTCCCAAATCCTTTGTGCGGGCCTCTATAACCGTGGCTATTAAAAGCGCGCTCCAAAGCGTTGAATCGCACGATTCAACGCTTTTCA TGGTGGAAACCGTGTTGAAACAGGAAGAAGCGGTGAATCCTTCCATGAGTCCCTGATTCTTTTGAAGCATATGAAGCTTGCTTAGGAGAATGAACCATAT TAACAAAAAATTATTTAGAAATCGTAAATTTGATACGACCCAAATATGCTTCATGTTCAATAATTTGCATTTCTAGCTCAGTGGTAAAACATTGGATCAG GATGAACACTAATATTATGTATCAAATCATTCCTAGCAATAATATTGTAACAGCTGTCTGTCTTTCCCTTCCTCCAATCTTTAAACCTATAATATTTCTA CATAGATTAGAAAAAGTGTTATGATCTCCTGCATTATTTCCCAAGTAAATGTCAATTATAAGGACATGTTTTATATATCATGTATAAAGTTGGTTAGTGC TTTCTGATATTATGAGAATATCAATATCTCTCTATATTTAGAGGCTTGACATTTTTTGAGATGAGAAACTTGGATGTTTTAGGCTAAGAGATATTAATAT ACAGTAAGGATTTAGTTACAATTAATGATAGTGCTAGGTATGAAATAACAAGTACATGAACCGAAGACAAGAAATTTAGTTTTCCAACACTCCTTGATAT TCTCAACAACATATTTTGATTTGGTACAATTTGTTCTGGACTAGACAGGAAAGGTCACTGCCACTTAGTTGGATATCAGCCAACAAATTTCAGATCACAA AATGCGCAAAAGGAACGCCACGTTCGACAGTCATCTGGACATTCAATGAATTCTCAGAGTGAGTTGCTTCCTGATCAACAGGAAATTTGTATAGTAGCTG AGGACCGAGACAATTTGAGTTTAGAACAGGCAGTTGGGGGTCTTGCAGCAAATGGGATGCATTGTTCGAATCTTGAGCAGCAGGGTACATCTGCAGGCAC TCCAGGGTCTGTATCTGTTGATAAAATCTGTGAAGAGAACATTATACTTTTCATGAGGTGTGAGGAGTACAGGAAAAGGGACATCGAGTTGAAACAAACG GTTGAGGAGTTGGAGGGGGAGTTGAAAGAAGTCCAAACTAAGTGTGTTCATCTTTCTTCACTCTTGGAGGCTAAGAGGAATCACAAGAATGTAAAAGGGA AGTAATATCACTCTTCTATCATCATGTTAATGAATTGTATGCTGACTATGCTTTCTTCCTTAACTTCCAATCATGTGATGTTATGTGAAAACACCAGTTT TGTATATGTATACCTCTGTTTGGAACTAGTCTGGCTTGTTTTGTAGAACCAAATTTGTCAAAGTTTGTGTGGCCTTATATTATAAACACCAGTTCTTTAT TGAAACATTGTATGGCCTTATATTGATTTAAAGTTTGTGAGAATCTGATTTTCTAGGTTCTGGTATAGCATTATGCCGTCGTTCGATCCATATAGCCGAT CATGCCTAGTGGGTATATAAATAAAAGATTCATACGTACAAGTGCACCATTCTTCACCTACTAGC
• Tissue: pods
• Gene name: LI_gene_141356;
• Additional information: details;

Expression of Ll_transcript_393488

FPKM

• PAB: 1
• PNAB: 1.8
• PS1: 1.1
• PS2: 2.2
• PS3: 1.2
• PW1: 1.6
• PW2: 1
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_393488

• Blastp: Protein MICRORCHIDIA 2 from Arabidopsis with 64.71% of identity
• Blastx: Protein MICRORCHIDIA 2 from Arabidopsis with 67.88% of identity
• Eggnog: MORC family CW-type zinc finger(ENOG411033B)
• Kegg: Link to kegg annotations (AT4G36280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422114.1)
• Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF13589.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;