Ll_transcript_392263

• Id Trinity: TRINITY_DN45937_c2_g5_i2
• Name Transcript: Ll_transcript_392263
• Sequence: CTTCTTCTTCATCTTCTTCTTCTTATTATTATTCTTCTGTATCACCTTCTTTCACCCAAAACGTTGTTGCTGATTCCTTCAAAACCTGGTTCAAATCCTC CACCACTCGCGACCCATTACTCCACCGCATCTCCCATATCATCTCCTCCACCGATGAATTCTCCGGCGCCCTTTCTTCCCTCCCTCTTCCTCCCCTTACT GAGCCTTTTGTTCTCAGCGTCCTCCGTCATCTCTCCTCCTCCGCCACCTCCCACCGCCACGTCCTCTCTTCCCTCAAGTTCTTTGACTGGGCTGGCCATC AACCTGGGTACCACCACTCTCGCGCCACATTCACTGCAATATTCCGCATCCTTTCCAACGCCAACCTCATGCCTCTCATCCTTGACTTTCTCCACACCTT CCGAAAGCGCCGCTATGCCCACCGTGTCCGTTTCAATGATACCCTTGTCATTGGGTATGCTATTGCTGGAAAACCTGAGATTGCACTCCATGTGTTTGGT AAAATGCGTTTTCAAGGTCTTGACTTGGATACCTTTGGTTACCATGTCTTGTTGAATGCTCTTGTTGAGCAAAACTATTTTAATGCTTTTGAGGTCATTG CCAAGCAGATTCGGTTGAGGGGTTATGAGAATCATGTTACTGATGCTATTGTTATTAAGAGTTTGTGTAAGCAGGGTAGGTTGGATGATGCTGAGGCTTA CTTCAACGGGTTGGTTAGTAGTGAGAAAGAATTGGATGGTTCTGAGGTTAGTGTGCTTGTTAGTGCATTCTGTCAGAATAACAGGTTTGACAAGGCAATT CGCTTTGTTAGGGAGTTCGGTGAAATGGGGTTGGTTCCTTTGGACAATGCTTATGGGGTGTGGATAAGGGGTCTTGTCTGTGGTGGGAGGTTGGATGAGG CATTGCAGTTTTTTTGGCAGAAGAAGGATGAAGAAGGCTATGTGCCTGGTTCGGTCAGGTATAACATTTTGATTTGGAGGCTTTTGAGGGAGAATCGACT TCGTGATGTTTATGATTTGTTGATGGATATGAATGAGACTAGTACTCCACCTGATATGGTTACCATGAATGCTGTCATGTGCTTCTTTTGTAAAGCGGGG ATGGTAGATGTCGCGCTTGAATTGTACAATTCTAGGTCTCAATTTGGGTTGTCTCCCAATCACATGGCTTATAAGTACTTAATACTTACTTTGTGCTGGG ATGGATGTGTCAAGGAAGCATACAGTGTGTTGAAAAGCTCGGTTGGTCAAGGTTATTTTCCAGATAAACGAACCTTCTCTACTCTGGCCAGTGCTTTGTG TAGGGAGTGTAAAATTGATGAGATGAAGGAGTTGCTCCATCTTGCCTTAAGCCGGAATATTATGCCTAACAGTTCCACATATGACAAGTTTATATCGGCA TTGTGCCAAGCCGGAAGAGTGGAAGATGGTTATTTGATGCATGGGGAACTTAACAATGAAACTGCTAGGATGTCCTACTACACAAAGATGATTATGGGTT TTAAGAAGTTGAAAAGGGGAGATATTGCTGCTCGTCTTCTTGTTGAGATGAAAGGGAAGGGTTATATACTGACACGGCCCTTGTTCAGAGCCGTTCTTTG TTGTTTACTTGAAATGGATAATCCAAATGCGAAGTTTTTCAATTTGTTGGAGATGCTGTCTCGTCATGGAAATCATTGCCAGGTTTACAACTGTTTCATT GAGGGAGCTGGGCTTTCCAAGAAGGCTGACATGGCCAGGCAAGTATTTGAGTTGATGCAAAGGAATGGCGTTGAGCCTGATATGTCGTCTCAAGTTCTTA TGTTGAAGAGTTATTTGAAAAGTGAAAGTATTTCTGAAGCTCTAAGTTTCTTCCATAATCTCCGGTGCCAGGGTATTGTGAGTAGAAAATTGTTCAATAC CTTGATTGTTGGTCTCTGCAAGTCCAATAAGGTGGACATTGCACGTGAATTCTTGTTTGAAATGATTAAAGCTGAATTAAATCCAAGCATCGAATGCTAT GAGGTTCTTGTGCAGCAGCTTTGTTCATCACAAAGATATCGTGACGCAATAAATGTGGTTAACTTGTATGAGAAAATGGGACGTCGATTAACTTCTTTTA TTGGCAATGTACTTCTTTATCATTCTTTGATTTCACGGGAACTTTACGATGCATGTGCTCAGTTGAGAGGAGTGGGAGATGGAGAGTTTTCTGGTAGTTC AATGCTTACCTTGATTATTGGTGCATTTTCTGGTCACCTCAGAGTAAACCATTTTATTGAAGACTTGGAGGAATTAATATCGAAGTGCTTTCCGCTCGAC ATTTACACCTACAATTTGTTGTTGAGAAAAGCAAGCCATGGTGACATGGACCAAGCTTTTGAGTTGTTTAGTCGAATGTGTCAAAGGGGTTATGAGCCTA ATTGGTGGACTTATGACGTCATGGTACATGGTTTCTCGAAGCATGGAAGGCAAGATGAGGCTAAGCGGTGGGTTGAAGAAATGTCCCAAAGAGGCTTGTA TCCAAAAGAGAGCACTAGAAGGAGGAGAACATTCGTTTAAAGAGAATCTTCTGGTGCTCCAATCAATGTGTTAAAGATGCAAAATGGTTAACACAATTTT GGAATGCAGAACAAGAGGCGAAGCTTCAAATCTGGATTGTTGTTCTCACTTGTTTTATGTCACATTGGATTTTGCTATTTTTGTAAGTTTTTCTGAACCT GCCCATTAGATGCTCCATTCACTAAGAAATTAATTAAAAGCCTTTTCCCTTCTCTCTTTTTAATCATCATTAATTTGCCACAATAGAATATCCCATGTTT TGCC
• Tissue: pods
• Gene name: LI_gene_141409;
• Additional information: details;

Expression of Ll_transcript_392263

FPKM

• PAB: 0.2
• PNAB: 0.5
• PS1: 0.8
• PS2: 0.2
• PS3: 0.6
• PW1: 0.7
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_392263

• Blastp: Pentatricopeptide repeat-containing protein At1g71210, mitochondrial from Arabidopsis with 43.78% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g71210, mitochondrial from Arabidopsis with 43.47% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G71210)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434547.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;