Ll_transcript_392268

Id TrinityTRINITY_DN45937_c2_g5_i3
Name TranscriptLl_transcript_392268
SequenceCTTCTTCTTCATCTTCTTCTTCTTATTATTATTCTTCTGTATCACCTTCTTTCACCCAAAACGTTGTTGCTGATTCCTTCAAAACCTGGTTCAAATCCTC CACCACTCGCGACCCATTACTCCACCGCATCTCCCATATCATCTCCTCCACCGATGAATTCTCCGGCGCCCTTTCTTCCCTCCCTCTTCCTCCCCTTACT GAGCCTTTTGTTCTCAGCGTCCTCCGTCATCTCTCCTCCTCCGCCACCTCCCACCGCCACGTCCTCTCTTCCCTCAAGTTCTTTGACTGGGCTGGCCATC AACCTGGGTACCACCACTCTCGCGCCACATTCACTGCAATATTCCGCATCCTTTCCAACGCCAACCTCATGCCTCTCATCCTTGACTTTCTCCACACCTT CCGAAAGCGCCGCTATGCCCACCGTGTCCGTTTCAATGATACCCTTGTCATTGGGTATGCTATTGCTGGAAAACCTGAGATTGCACTCCATGTGTTTGGT AAAATGCGTTTTCAAGGTCTTGACTTGGATACCTTTGGTTACCATGTCTTGTTGAATGCTCTTGTTGAGCAAAACTATTTTAATGCTTTTGAGGTCATTG CCAAGCAGATTCGGTTGAGGGGTTATGAGAATCATGTTACTGATGCTATTGTTATTAAGAGTTTGTGTAAGCAGGGTAGGTTGGATGATGCTGAGGCTTA CTTCAACGGGTTGGTTAGTAGTGAGAAAGAATTGGATGGTTCTGAGGTTAGTGTGCTTGTTAGTGCATTCTGTCAGAATAACAGGTTTGACAAGGCAATT CGCTTTGTTAGGGAGTTCGGTGAAATGGGGTTGGTTCCTTTGGACAATGCTTATGGGGTGTGGATAAGGGGTCTTGTCTGTGGTGGGAGGTTGGATGAGG CATTGCAGTTTTTTTGGCAGAAGAAGGATGAAGAAGGCTATGTGCCTGGTTCGGTCAGGTATAACATTTTGATTTGGAGGCTTTTGAGGGAGAATCGACT TCGTGATGTTTATGATTTGTTGATGGATATGAATGAGACTAGTACTCCACCTGATATGGTTACCATGAATGCTGTCATGTGCTTCTTTTGTAAAGCGGGG ATGGTAGATGTCGCGCTTGAATTGTACAATTCTAGGTCTCAATTTGGGTTGTCTCCCAATCACATGGCTTATAAGTACTTAATACTTACTTTGTGCTGGG ATGGATGTGTCAAGGAAGCATACAGTGTGTTGAAAAGCTCGGTTGGTCAAGGTTATTTTCCAGATAAACGAACCTTCTCTACTCTGGCCAGTGCTTTGTG TAGGGAGTGTAAAATTGATGAGATGAAGGAGTTGCTCCATCTTGCCTTAAGCCGGAATATTATGCCTAACAGTTCCACATATGACAAGTTTATATCGGCA TTGTGCCAAGCCGGAAGAGTGGAAGATGGTTATTTGATGCATGGGGAACTTAACAATGAAACTGCTAGGATGTCCTACTACACAAAGATGATTATGGGTT TTAAGAAGTTGAAAAGGGGAGATATTGCTGCTCGTCTTCTTGTTGAGATGAAAGGGAAGGGTTATATACTGACACGGCCCTTGTTCAGAGCCGTTCTTTG TTGTTTACTTGAAATGGATAATCCAAATGCGAAGTTTTTCAATTTGTTGGAGATGCTGTCTCGTCATGGAAATCATTGCCAGGTTTACAACTGTTTCATT GAGGGAGCTGGGCTTTCCAAGAAGGCTGACATGGCCAGGCAAGTATTTGAGTTGATGCAAAGGAATGGCGTTGAGCCTGATATGTCGTCTCAAGTTCTTA TGTTGAAGAGTTATTTGAAAAGTGAAAGTATTTCTGAAGCTCTAAGTTTCTTCCATAATCTCCGGTGCCAGGGTATTGTGAGTAGAAAATTGTTCAATAC CTTGATTGTTGGTCTCTGCAAGTCCAATAAGGTGGACATTGCACGTGAATTCTTGTTTGAAATGATTAAAGCTGAATTAAATCCAAGCATCGAATGCTAT GAGGTTCTTGTGCAGCAGCTTTGTTCATCACAAAGATATCGTGACGCAATAAATGTGGTTAACTTGTATGAGAAAATGGGACGTCGATTAACTTCTTTTA TTGGCAATGTACTTCTTTATCATTCTTTGATTTCACGGGAACTTTACGATGCATGTGCTCAGTTGAGAGGAGTGGGAGATGGAGAGTTTTCTGGTAGTTC AATGCTTACCTTGATTATTGGTGCATTTTCTGGTCACCTCAGAGTAAACCATTTTATTGAAGACTTGGAGGAATTAATATCGAAGTGCTTTCCGCTCGAC ATTTACACCTACAATTTGTTGTTGAGAAAAGCAAGCCATGGTGACATGGACCAAGCTTTTGAGTTGTTTAGTCGAATGTGTCAAAGGGGTTATGAGCCTA ATTGGTGGACTTATGACGTCATGGTACATGGTTTCTCGAAGCATGGAAGGCAAGATGAGGCTAAGCGGTGGGTTGAAGAAATGTCCCAAAGAGGCTTGTA TCCAAAAGAGAGCACTAGAAGGAGGAGAACATTCGTTTAAAGAGAATCTTCTGGTGCTCCAATCAATGTGTTAAAGATGCAAAATGGTTAACACAATTTT GGTAACTGCATTTTTATATTTACATATTTATCAGAAAATGGGTTACACTGAATGCATTAGTTTTAGTTTTCTATTTAAATTTTATTCTTGTTAATCTTGA GCAGCCCTTGTATCTTTTTTATTATATCACTCCTCTCTTTTTGGTTGTGGAAGCATTAGGAAATAAAATACGTTTCCACCTTGTATTATTTATCACTCTA GATTGACATAAGCTATGATATTTGACATAGCTTTTATACTTCATGTTATTTGAGTTTGACATACTGTATTTTGAAAGTTTTTAGAAGCATTGCTTCTTAA CCTCTTTTTATGCTAGTTGTCATTACACAATAAAAAACCAATATCAGTTGATTCATGAC BLAST
Tissuepods
Gene nameLI_gene_141409; 
Additional informationdetails; 

Expression of Ll_transcript_392268

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_392268
BlastpPentatricopeptide repeat-containing protein At1g71210, mitochondrial from Arabidopsis with 43.78% of identity
BlastxPentatricopeptide repeat-containing protein At1g71210, mitochondrial from Arabidopsis with 43.47% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT1G71210)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019434547.1)
PfamPPR repeat (PF01535.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;