Ll_transcript_392903

• Id Trinity: TRINITY_DN45945_c1_g1_i1
• Name Transcript: Ll_transcript_392903
• Sequence: AACAGAACACGAGTTTCAGAACAAAACAGAACACGAGTTTCAGAACAAAACAGAACACGAGTTTCAGAACACAAACTTGTTGAATCTCCAACCTTAGCCT CCGAAGTAATAGTAATAACTGAGAAGAAACATAACAATGAAACTTCCTTCAACTCTTTTCCTTAAAGCTCAAATTCCTTCCACCACTTTCCTCTTCTCAT CTTCCAAAGGTAAATCCAATGCAAAAATGCTTCCTTTTATCTTCTTCTGTAAGATGATTCAAAGCAGTTCTTATGAAGTTGCTAATGGAAGCTATCATCC AACTTTGCTGCAAGAAAAAGAAAATAATATAGTGGAAAAAGCATCTAGAAAAATTGAATCTATTGGAGCATTTCAGAAGTTGCCTATAGTGATGCCATCT ATTGACATTCTTGGGTCAGCACTAAAAAAGGCAAGGAGGGTTTCTGCAACAAAAGGAATTGCCAATATTGCAAAAAGAGAGAAAAACAAGGGCGCGAAGC AACTTGATGCATTGATGAAAGAACTTGCTGTTCCCTTGAGGACATATGTGGAGAATTTTCCGAAGAAAACATATCTTCATCCTTACGAAAGTTCTCTTAT TGAGTTGACTCTTGGAGATGGATACTACGAGAAGGTGCTACAAAAGGTAGATGCTTTAAGGAAGAGGGTAGTATCAGTTGGAAAGGAACATGCTTCAATT TGTGCTAAGTCTACGTCGAAGCGAGAAGCAGAGGAACGACTCGTTGAGGGTCTTAAGAAAATTGAAGAGATTTTTGCACAAGAACGAAAAGTTGTTGATG ATTTGTTAGTAATAGCCAAGACTCTGAGGGCAATGCCTGTAGTTGATTTAGAAACCCCAACACTCTGCCTTGTTGGAGCTCCTAATGTCGGCAAATCTTC TTTGGTCCATATATTATCTACTGGCAAGCCTGAGATTTGTAACTATCCCTTCACGACAAGAGGAATTCTTATGGGTCATATTGTTTTCAACTACCAGAAG TTTCAGGTAACAGATACTCCAGGCTTGCTAAAGAGGCATGATGACGACAGGAATAATTTGGAAAAGCTGACCCTCGCCGTACTTTCTCATCTACCAACAG CAGTTTTATATGTTCATGACCTCACCGGGGAGTGTGGTACCTCGCCTTCTGACCAGTTTTCAATATACAAAGAAATCAGAGAAAGGTTTACTGGGCATCT ATGGCTTGATGTTGTGTCCAAATTTGATCTGATGAAGACATCTCCCGTGGTCTATGCGACAGATGAACCTTCCGAACAACTTGATCTGGAGAAGTACCGG AAATCAGGTCCTGATGGAGCTATTAATGTATCTGTGAAAACAGAAGAAGGACTAGATGAGCTGAAGCACAGAGTGCATGAGCTCCTTAATTTGCAAATGG CCAAGATAATAACTATAGACAACAACAATCAAGAAAAGTGAAAGGTACAACATTCTTGGGTTTCATCAAACTTGTGAAGAAAGTTCCTGTTAAAGTATGA ATGTTGAGATCTTCACAAGCCTGAATATCTTCTTTGGCCACACTTCAAAAAGGAAATTAAGCAAAAGCTTGATTGAATGCTCTTCACTACTGCCCTGTAA TATGAGGGGTCACAAGTTGAGCATGTGAATCTTCCATGAAAGTGGTTGTTGGCTTTTTTGAGTGGATCATTCTTGTTCTAACCATGTTGGACCTTGAACA AACAATATAAGCTTGTTTCTTGGCCTTCAAACTTTCTACTACATCTAATCCTGACATAATTTGTTGTAACTATGATTATCTCAAATCCATTGTTCAGAAG TAATTTGTCTGCTTTAAGGATTTATTGTTCATCCTTGTGTCATCATTGCTTGTCAATTTCTAGGCAAAATAGTATTTTTTTTGTTTCCCACAAGTATCCT CGCACTGGAGGTAATCTTGTTCGAGCCGGGAAAATCTACAG
• Tissue: pods
• Gene name: LI_gene_141440;
• Additional information: details;

Expression of Ll_transcript_392903

FPKM

• PAB: 1.9
• PNAB: 6.9
• PS1: 7.6
• PS2: 3.3
• PS3: 6.6
• PW1: 5.5
• PW2: 5.2
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_392903

• Blastp: Nucleolar GTP-binding protein 1 from Mus with 28.52% of identity
• Blastx: Nucleolar GTP-binding protein 1 from Mus with 28.52% of identity
• Eggnog: Involved in the biogenesis of the 60S ribosomal subunit (By similarity)(COG1084)
• Kegg: Link to kegg annotations (69237)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450037.1)
• Pfam: 50S ribosome-binding GTPase (PF01926.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;