Ll_transcript_392847

• Id Trinity: TRINITY_DN45947_c0_g1_i5
• Name Transcript: Ll_transcript_392847
• Sequence: AAAATGACTCATAAAGTATTAGAATATATGAAATCTATATCTATCTCCGATTAGATTTGATATATTAAAATTGAAACTCGACTCTTAACATTGAAGAAGC TACGATGGGTTTGGGAAGTGGATGCAGCATCAGAGCTATTTGGATTCTCAATAACCTCGACGCCGTCGTTTTCTCAAGGAGATTTCCAATTGTAGAGAAG CGTTGGCGAAATGCTTCCAATTCTCACAATCAAATCGATGATTCCGCTTTATTCTCTTCATTACCCACTGATTTTTACCTAGCCGATGCTTTTCTCCACA GAAAACATAGGGAAGGATCTGCACGTGGATACGGCGTACGTAAAAGTCAGTCGACTCCGGGGTCGGATTCTTGGGTGGATGATCCTATTACTCGTCATAT CGTAGGTCTTTACATTAACGAGGAGGAAGAGGAGGGTGGCGATAAGAATCTTTTATGGCCTTTAATATTGCACATAAAGGGCCATTACACTATACTTGTT CTGCCTTTGGTTGAGCCAAGGCATTTGAATGCGTATGCTAAGCTATGCAAGAGAGTTGATTGTGGAAGTGCTCTTGGTCTGGATGATGATTTGTCGTCTC TCTTGCTGGATCTTCCATCAATAACAGGGGCGTTTATGATAGCGCATGCTATTGGTGACATAATTACTGGTGACACAGTAGAACCTGAAGTCATTGTTAC TGCAGCTCCTTCTGTTGGAGGGCTGTTTGATTCACTAACTGGTAGTATAGGCATCTCTTCCAGAGCGAAACCTGTAGCTGCACCAGTTGCATCTTCCTCT CCTTCGAGCGCAGCTACACCAGGATCTGTTACAGCAGATGCTCTAAAAACTGGGTCCAGGCCATTGGATAAAGATGCACTCCGAACATTCATCAGTAGTG CAATGCCCTTTGGTGGGTACTTTTTATTATGGCACACCTTTGGACCTTAATTATTCCAATATATTTACTATCAAGGGCAATGGCTTTTCTGCATCAGATT TGCCTCCTGCAGACCAAAAGCAACCAGCTTGGAAGCCATATCTGTTCAAAGGAAAGCAGAGAATGCTGTTCACGATTCATGAGACTGTTCATGCAGCTCT CTATGATAGGGATGACATTCCAGATATTATATCAGTTTCTGGTCAAATAAATTGTCGAGCTGATCTGGAAGGGTTGCCAGATGTCTCGTTCCCCTTGGCG GGATTGAAGACGGCAAACCTTGAGGTTTCATCATATCATCCTTGTGCTCAAGTTTCAGATCAAGGTTTGGATAAGCAGGGTGTAATGTTTTCTCCACCAT TAGGTAATTTTGTGTTGATGCGTTATCAGGCAACTTGTGCCCTTGGACCTCCTGTAAAGGGATTCTATCAATTGTCAATGGTTTCTGAGGATAAAGGAGC ATTTCTATTCAAGTTGCGTTTAATGGAAGGTTATAAGGCTCCTTTGACAATGGAATTCTGTACTGTAGCTCTGCCCTTTCCTAGGAGGAGGATTATATCT TTGGATGGGACTCCTTCCTTAGGAACAGTTTCAACTTCAGACCACTCTCTTGAATGGAAAATTGTGACCAGTGGACGGGGACTGAGCGGAAAAAGTATTG AAGTGACTTTCCCAGGAACAATTAACTTCGCACCATGGCAAATCCAAAGGGCACCTTCTTCCAGGTCATCCTTTGGAATCATTGCTGATGATGATAGTGA TAACGAGGCAGAAAATTCTAGCAATATGGTTAATGAAGAACACTTGATGGAGAAAATGAACAAGGATCTTCCTCCAGTTGATCTAGAGGAACCATTTTGC TGGCAGGCATACAATTATGCTAAAGCATCCTTCAAGATTGTTGGAGCATCAGTGTCTGGAATTACCATTGATGCTAAATCTGTGAGCATCTATCCAGCTG TTAAAGCACCTGTGGAGTTTTCAACCCAGGTTACTTCTGGGGACTATATTTTGTGGAATACTCTTGGTAAGTGTCCATATGTTGCTACAGTAAAGGTGTA GGCATGAATGGACACCATCATCAGGTATCTGGTGGAAACTCTGAAATGATGTTCTATCATTCTTTGCTGAGTATGTGGAAATGAACAATTTGGTGTTTGC TATTAGGAACACTGGTTATTGAATCTCTTAATTACTTGAATAGAGAGCAATAAATGTTCTTTTTAATTATATATTTAATGTATTTTTTCCCAAATTCTTT TTTGTTATCTGTACAGTCCAGATGGAAGTTGTATTGCATAATTCTCTCAGGCCACTGGGTAGGTGGAGAAATGTAATTCACATTATGCAAGTTGTTTTGT GCTTTAAATCATTAATCTCACATTTGTTTTGTGCTTTAAAA
• Tissue: pods
• Gene name: LI_gene_141461;
• Additional information: details;

Expression of Ll_transcript_392847

FPKM

• PAB: 0.1
• PNAB: 1
• PS1: 0.3
• PS2: 0.4
• PS3: 0.1
• PW1: 0
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_392847

• Blastp: AP-5 complex subunit mu from Arabidopsis with 69.58% of identity
• Blastx: AP-5 complex subunit mu from Arabidopsis with 69.1% of identity
• Eggnog: Adaptor-related protein complex(ENOG410XPFS)
• Kegg: Link to kegg annotations (AT2G20790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463021.1)
• Pfam: Adaptor complexes medium subunit family (PF00928.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;