Ll_transcript_392224

Id TrinityTRINITY_DN45958_c6_g1_i1
Name TranscriptLl_transcript_392224
SequenceAGCTAAACAAGAAGGATCACATTATGAATGGGAAGCCGAAAATAGTTAGGCAAAAAGGATATATATGAGCAATGTGGAAGCTTGCAAATGTTAGTAAAGT TCAAGCAACAACCAAGTCTAAAACTTTAGTGGACATTCTCACCTCGGATAGAATTGACACGAAAAACTACAACAGCGTATTTTGTCCTTTGTCCCATAGG GTGTTATGTCGTTGAATACCTTTTTCGCACAAATAAAAAACCATTGATTTTAGGATATTCAAATAGTGATTCACTTACACCGTTGGTTTTCTTCTCCAAC ATCATTCCGCGCAAAATAAACACATGTTTTACATGACACCCTCTTTTTATTCTTTTTCTTCTAACTATTACTGCGCATTTCTCAAACTTTACTGCGAAAC CCGCAACCTCGCCAACGCAAAGAAACTTCATTGTCTCATAATCAAGGCCTTTCGTAACCCAGAAACCTTTCTCTTAAACAATCTCGTTGGTTCCTATGCT AAACTCGGCAACATCACCTATGCCCGCAAGGTGTTCGACCATATTCCTCAACCAAGTATTTACTCGTGGAACACCATGCTCTCTTCATATTCCAAAATGG GTCTTGTTCCTGAGATGGAACGCGTGTTTTATGCAATGCCAACTCGTGATGTGGTGTCGTGGAATTCGCTTATCTCGGGGTATGCTGGTTGTGGCTCAAT TGTTCAATCAGTTAAGGCTTATAATTTGATGTTGAATGATGGGTCGTTCAATTTGAGTCATATCACGTTCTCGACTATGCTTATACTTGCATCCAGTCAG GGGTGTGTTCAGTTGGGCAGGCAGATACACGGGCATGTAGTGAAATTCGGTTTTCGGTCGTATGTTTTTGTTGGAAGTCCTTTGGTGGATATGTACTCGA AATCAGGATTGATATCTTGTGCAATGCAGGCTTTTGATGAGATGCCTGAGAAGAATGTGGTTATGTATAATACTTTGATCAAAGGGCTTATGCGATGTGG TAAGCTTGAGGATTCAAGGCGATTGTTTTATGATATGAAAGATAGGGACTCGATTACTTGGACGACAATGATTGCCGGATTTACTCAGAATGGTTTTTAC AGAGAAGCAATTGATTTGCTCGGGGAGATGAGTTTGGAAAAGCTAGAGATGGATCAGTATACATTTGGAAGTGTGTTAACTGCTTGTGGAAGTGTTATGG CTTTGCAAGAAGGCAAGCAAGTTCATGCTTATATAATTAGGACGGATTATAAGGATAACATATTTGTGGGCAGCGCTCTTGTCGACATGTATTGCAAGTG TAAGTGTATAGAATCAGCAGAAACAGTTTTCAAGAAGATGACTCGCAAGAATGTTGTATCTTGGACAGCGATGTTAGTGGGTTATGGACAAAACGGTTTT AGTGAAGAAGCTGTTAGAATCTTTGGTGATATGCAAAAGTATGGGGTCGAACCAGATGATTTCACCCTTGGGAGTGTAATTAGCTCATGTGCAAACCTTG CTAGCCTAGAGGAGGGTGCCCAATTCCATGGTCGAGCTCTAGTTTCTGGCCTAATTTCTTTTCTTACGGTTTCCAATGCTCTAGTTACGTTATATGGTAA GTGTGGAAGCATTGAAGACTCCCATAGACTTTTTAGTGAGATGAGCTTCAGGGATGAAGTCTCATGGACTGCACTTGTTTCCGGATACGCCCAGTTTGGT AAAGCGAATGAAACAATCCGGTTATTTGAAAGCATGCTAGCCAATGGCTTAAAACCTGACAGGGTTACTTTTATTGGAGTGCTTTCAGCTTGCAGTAGAG CAGGATTAGTAGAGAAAGGAAATAAGATATTTGAATCAATGGTTAAGGAACATGGGATTGTACCAATGCAGGATCATTACACCTGCATGATTGACCTCTT CAGTCGAGCCGGTAGATTAGAAGAGGCAAGGGATTTTATACATAAGATGCCTTTCAATCCTGATGCAATTGGTTGGGCAACCTTATTAAGTTCATGTAGA TTCTACGAAAACATGGAAATCGGCAAATGGGCAGCTGAGTTCCTTCTCGAATTAGAACCACATAACACGGCTAGTTACATCTTACTTTCAAGCATATATG CTGCTAAAGGAAAATGGGAAGAAGTTGCCAGATTAAGGAAAGGGATGAGAGATAAGGGACTGAAAAAGGAACCAGGGTGTAGCTGGATCAAATATAAGAA TAAAGTGCATATTTTCTCTGCTCACGATCGGTCAAATCCATTCTCAGATGAAATATATTCCGAGCTTGAAAAACTGTACCACAAAATGATACAAGCAGGA TATGTGCCTGATATGAATTCTGTTCTACATGATGTTGAGGATTCGGAGAAAATAAAGATGCTTAATCACCATAGTGAAAAACTTGCGATTGCTTTTGGGT TGATATTTATTCCTCCTGGACTTCCCATTCGAGTGGTTAAGAATCTGAGGGTTTGCGGAGATTGCCATAATGCCACTAAGTATATATCTAAGGTCACCCA GAGAGAAATCCTTGTAAGAGATGCTGCCCGGTTCCACTTGTTTAAAGATGGAAAATGTTCATGTGGAGATTTTTGGTGACAGGACTAGTTGTTATTTTAT ACTCTCTAAATTCTAAAGCATTTTTTCCATGCAACACAGTTTTGTAGATACATTTTAGATGCAACTATAAATACTGGAGTAGATACATTTTCTTACGGCA GAGACCAGAGCATTTAAATGCAACACAATTTTGGAAGTGTTGTCAAATCTGACATCATATGTTACAGTTATTCTGCAGAGGAAGTTGAGACTTGAAATGA ATGAGGTGAGACTATGAGAGAATCAATAATGAATGTATAAAATGTTTGAGTAGCAGCCATTTCGAAGATGATTGAAATTTACTTTTGCGAGTTGGATTTT AGATGGGAAAGAAAAGGAAAGCTTCAGAGCTATATGATAAGTGTATTTCATGTATCCTAAGGGTCCGTTTGCGAATTGAGTTTTGGAGGGGAAAGAAGTG AGATGGAAGGCTTGAGAGCCATGAAATATACTTGTGAGATGACTTTGCCTTTCATTTCCCTTCGTTCATCTCCAAAACATAACTCGGAAACAGACCCTCG AATGATTTTGTCATATGAAAAGACAAACAGAGGGAAGATCAAAGAAGGCTTCAGGAGAAACTAGAAACCATTGGAAAACATATTGCTGGAAATGGATTTC TTGAAATTTTGGTTTTTGGAAGAATCTTTACCTTCTTGGCTGTCTTTGCTTTTGATTTTTCTGCTCCTGTTGTCCCCTCTAGTTTTATTTTCCTCCTTTA CCTATAATAAATTGTATTCTTTTCATAAACATAAATCATTTTCATAAACTTGAGTATGGAAAAAATCCGGTGTGTATCTCGTTGATTTACACTTTAAGTG TGATGTTTTCTGTTGTGAATAGTGTGTTTAATAGTCAAATGGTTAAATGCTTTGCATAAAAATGAGACAGGAATAAGCATTGAAGATGTTTCTACCCTTT CATCTGGCAACATTTTGGTTTATCTGTCTACCTGTATTGTGTGCATGTTATATATGTTTTTTATGATTCTCTCTCCACTATTTTGCAGGGTTTGGCATAC CAGTTTTTGGAAAATTAAACATGTAGTAGTAGTTATACAAAAAACCACACCATACAAGCTTATTAAAAGGATTATACATTTGAGTGTAATATCTACATAC CGTTAGTGTAAAGATTTATATATTCGATACATCATCTACCATTTATTTTTATTACTTTTTTGAAAAGTATAATGATTAAATATGAATGGTGGATGATGTA TTAACAATATATAAAATTCGTATACGATCAATGCATGCATATTT BLAST
Tissuepods
Gene nameLI_gene_141505; 
Additional informationdetails; 

Expression of Ll_transcript_392224

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_392224
BlastpPutative pentatricopeptide repeat-containing protein At1g68930 from Arabidopsis with 61.42% of identity
BlastxPutative pentatricopeptide repeat-containing protein At1g68930 from Arabidopsis with 61.42% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT1G68930)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019457346.1)
PfamPPR repeat (PF01535.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;