Id Trinity | TRINITY_DN45962_c6_g3_i1 |
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Name Transcript | Ll_transcript_392434 |
Sequence | ATGAATTAGTACCTAGTCATGTCGGCCATTAAATTTGCCCCACTTGGTCCAGGGTGGGTTGTAGGTCCAAGTTCAACAGCAAGAGTAGGTGGCTAAACAC AAACCATTTTACTTTCTTCGCAGTTTGAGCCACATGCTTAAATTTTCACTTTAGCTGCTGAGTGCTTCAATAGTTTGTAACATCAATCATCATTAGTGTC CGATAATGGGAGAAGTAGAAAACAACAAGCAGGTTATATTTAAAGGCTACATAGATGGAGTCCCTAAAGAGACAGATTTGGAAATCAAAGTAACCAAAAC TGAGCTTAAACTTCCACACAATGGATCAGAAGCCATTCTAGTCAAGAATCTCTATCTTTCTTGTGATCCTTATATGCGTGGTCGGATGCGTGATTTCCAT GATTCTTATATTCCACCTTTTGTTCCTACTCAGGTAATTAACTTTATATCCAAGATTTAAGACAAGTTATATATGATTGTAGTGCTTAACCATGATTTTA ATAAATTAGTACTTTGTTCAATATTTTTAGAAAGAAATAAAATATAATTATTTTAGGTTCTTTAAGTAAAAAGATACAGACCTTTTGTTACAGTTAAGAA CAGTGTATTTAGTGTAATTGTTGTGGGAAAATATGGTTGATGTGGTTGCAAGTTGCAGTAGTGATGTCATTGAAGAGACTTCCAAAACTGTAATATTATG GCTGCAATTACTGTTTCAAGCAGTCTAAGAATTGAGAGTTTAAGTAAAAAAGGCTACCTAAAGCACGAGGCACCCACTTAGTGGGACGTAGGGATGATAG ATGTATGCAACCATCCCATAAGTAGAGAGATTGTTTCTAGGATTCGAACCTGAAACCACATGGTCATTAAGCAACAACCTTACTGTTGTGCCAAACTCAC GGTCTAGTTGAGAATGTTAATAATTAGTAGTACTTTTTAGACAAAAAGAAATGGTTTTACTAAGCTTATGCTTGGCTGCCTGTGCTTTCATGTTTTGTTT ATAAAATTCATACCTGTTTTGACACATCTAAAGCTATAATAATTTGTTTGCATAATACTCCTCTTAAATTATATACATTAAATTAAAGAAGATTAATTTA TAATATAGTAATTCCTGCGTGCCTATTTTGATGAAGGAAGGTCTTAGAAGGATTTGGTGTATCCAAAGTTATAGATTCCGATCATCCAAATTTCAAGCCT GGTGATTTCATTTCTGGTTTTACTGGCTGGGAACAGTATAGCTTGATTAAAAAAACTGAGCAGTTGAGAAAAATCAAGCCAGATGATGATATTCCGCTTT CCTTCCACGTTGGTCTTCTTGGAATGCCAGGTTTTACCGCTTATGCAGGATTTTATGAGGTCTGCTCCCCGCGCAAAGGAGAATACGTTTTTGTATCAGC AGCATCAGGTGCTGTAGGTCAGCTTGTAGGCCAACTTGCTAAGTTGCATGGCTGCTATGTGGTTGGAAGTGCTGGCTCAAAGGAAAAGGTCGAAATTCTA AAGAATAAGCTTGGATTTGATGAAGCTTTTAACTACAAGGAAGAATCGGACTTGGATGCCGCTCTGAAAAGGTATTTCCCACAAGGCATTGACATCTACT TCGATAATGTGGGTGGGGACATGCTTGATGCTACACTCCTTAACATGAACATTCATGGGAGGATTGCTGTTTGTGGGATGGTGTCTCAACAAAACCTATC TACTCCGAAAGGGATTCATAACTTACTGAACCTCGTCACAAGGCGCATCAGAATGCAGGGCTTTTTGCAAAGTGATTACTTGCACTTATACCCTCAATTT TTGGAACATGTTGCAAGTAGCTACAAGCAAGGAAAGATTTTGTATATTGAAGACATGAATGAAGGCTTGGAAAGTGCTCCAGCTGCTTTCACTGGCCTTT TTTATGGCAAGAACATTGGTAAGCAAGTCATTTGTGTTACTCGTGAATGAGTGTTTTCCTAGTACAAGCCTAAAGTGACCTAATGTACAAGACTCTTACT GAATGGGGTCTGATGATAGCATCCGAGCTAAAGGATTCTTGGATTTGAATATCATACCGGTAAATTAGCTTACTCAGTTGTAAACAAATCCAATGGAAAT CTCTCTGAAGAACATGACCATCACTGCTTTACTTTCTCTTATCTTCCTTATCTATGAAAAGAATGTTAAATTTTTTGAATATGCCTAAATTATGTTGCAA GGAAAGTGTTTATTTGGATATAGCTCATGAAAATGTGGTTGTGGACTTTCGTCCACAAGTTTTCACTTGTCATTTACATAGGTTTAAATATTTTTCTAAT AAAAAGâBLAST |
Tissue | pods |
Gene name | LI_gene_141559; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_392434
Blastp | 2-alkenal reductase (NADP(+)-dependent) from Nicotiana with 72.12% of identity |
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Blastx | 2-alkenal reductase (NADP(+)-dependent) from Nicotiana with 67.16% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (BAA89423) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443107.1) |
Pfam | Zinc-binding dehydrogenase (PF00107.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |