Ll_transcript_392436

• Id Trinity: TRINITY_DN45962_c6_g3_i2
• Name Transcript: Ll_transcript_392436
• Sequence: ATGAATTAGTACCTAGTCATGTCGGCCATTAAATTTGCCCCACTTGGTCCAGGGTGGGTTGTAGGTCCAAGTTCAACAGCAAGAGTAGGTGGCTAAACAC AAACCATTTTACTTTCTTCGCAGTTTGAGCCACATGCTTAAATTTTCACTTTAGCTGCTGAGTGCTTCAATAGTTTGTAACATCAATCATCATTAGTGTC CGATAATGGGAGAAGTAGAAAACAACAAGCAGGTTATATTTAAAGGCTACATAGATGGAGTCCCTAAAGAGACAGATTTGGAAATCAAAGTAACCAAAAC TGAGCTTAAACTTCCACACAATGGATCAGAAGCCATTCTAGTCAAGAATCTCTATCTTTCTTGTGATCCTTATATGCGTGGTCGGATGCGTGATTTCCAT GATTCTTATATTCCACCTTTTGTTCCTACTCAGGTCTTAGAAGGATTTGGTGTATCCAAAGTTATAGATTCCGATCATCCAAATTTCAAGCCTGGTGATT TCATTTCTGGTTTTACTGGCTGGGAACAGTATAGCTTGATTAAAAAAACTGAGCAGTTGAGAAAAATCAAGCCAGATGATGATATTCCGCTTTCCTTCCA CGTTGGTCTTCTTGGTATGCCCCATTCTAAGTAGTCCTCTTGTGCTTAAAATATTATAACATGATACTTTGTTATCATTTAGTATCAATTCTTTTTCTCT TTTATCACTTTAGATTTGTAATTATTACTCCTTAGCATTTGTTTCTCTATGTTTATGATTATTACTTTTTTGAATCATATTTCACAACTATACTTCAGAC ATAAATATTTCATTATGATAAGTTAGGATCTTGACAAAAACACCAAGTCAATGCTAGTTTGGTTCAATCTACACTTTGAGCTGTTTTCCAAACAATGGGT TTTTGATTTGGTGGTGATCAGCAGTCTTGAGTTCCTTTCTCTACGTTCAGATTTTAGGTTGTTCAAGCTTCAAAGTGTTAAGGGTTTCTGATACAAAATA GAGTTGGTTAGAATCGTAACAATGATAATTAGTCTGTGAAGGGTATAAATAAGTCGTTGGAGTCAACGTAACCAGTTATTGAAATCATTTGGATCATTAA ATTCATTTGGGAGTCTTTCTACATGAGTCGAAGAGGAGTTTTATCAATTGGTGCTTTCATTGAGAGCCAATCGAAACCCTCTTGTTTGTTCAAGAGAAAA ATGATGATCTCACACTTCCGTCGGAGATTCTTGGATACTATCCAAATGTAGCAAGGTAAAGGTCTTGAATACTCTTTACTTATTTTTGGAATTTCCCTAA TTCCTATTGCATTTACTCAACGAAGATGTTTTCAACAGTTATTCCTTATTGGTGATCGGAAATTGTGAGAAACGGTGTAGAAGGTGTATCAAATATGGAA AGGTTTCGGGGAGAGTGAGGTGGGCAAGGATCACATTGGTTGGAGTAGAAGAGGGAATGTTCAGAAGTTTAAAGGAAAATGGTTGATGAAACTGCTATTT GAAGAAAATGGTTGATGAAAATGGTTTTGGGGAAAGAGTAGCAAATATGTAATGTTCACATTTTGATCACACAGTTGCAACCAAGGAAGCTATTTGAAAA AAGGAACTTGTTTCTAAAAAGTCAGACTTACACGAAATACTTAAATTGATTCATATTGCACTAGATACACATACTACCGCTGAGAAAGCAAGAGTAGTAA TAGAATCTGGCTGAGTAGTCAAGCCTTCCAATGGGATTTGTTGTGTGGGCCAAAGGCTTCTGGGGACACCACCTTTTAATTTATATTTGACCGCACCACA GAATCTAGAAGGTCATTGGGCTATATTGAGGTTGGCCTAATTGTGGTGCACAGGTACTTAGCTCTGTGTAGTATAGTTCACCTGATGTGATGGTTGCACG GGTTTAAAGTAGTTTTGGCTTCTTATTCATTGTCTGTTATTTTTATATCAACCTCGAGTGCAAGGTATTGATATGAATTAGAGTTAGTTAGAATAGTTAC AATTATAGTTAGTTGGTGAGAGAAGAGTATAAGTAAGCCATTGGAGGCAATGTGATCATTTAGTGAAGGTCTTTCTTCTTGACTCAGAGAGGGGGTTTCT ATCCGTTTCTTTCTGTAATTTCGACTAAAGAATACAAGTGAGTCGAATTTCCTTATATGTGAAAATTATCTATTTTATGGCAAAGCTGTTTTGAATATCA GGATGGAGGTATGTTTTTTTGCCTTTCTTTTCAGATTTATATATTGGAGTGGAATCCACTTCTACTCTTATACTTGTGATCCACTTGACAAACTTCGGTA AATAGTTAACCTATCACATACCCTTTAATTTTACAGGAATGCCAGGTTTTACCGCTTATGCAGGATTTTATGAGGTCTGCTCCCCGCGCAAAGGAGAATA CGTTTTTGTATCAGCAGCATCAGGTGCTGTAGGTCAGCTTGTAGGCCAACTTGCTAAGTTGCATGGCTGCTATGTGGTTGGAAGTGCTGGCTCAAAGGAA AAGGTCGAAATTCTAAAGAATAAGCTTGGATTTGATGAAGCTTTTAACTACAAGGAAGAATCGGACTTGGATGCCGCTCTGAAAAGGTATTTCCCACAAG GCATTGACATCTACTTCGATAATGTGGGTGGGGACATGCTTGATGCTACACTCCTTAACATGAACATTCATGGGAGGATTGCTGTTTGTGGGATGGTGTC TCAACAAAACCTATCTACTCCGAAAGGGATTCATAACTTACTGAACCTCGTCACAAGGCGCATCAGAATGCAGGGCTTTTTGCAAAGTGATTACTTGCAC TTATACCCTCAATTTTTGGAACATGTTGCAAGTAGCTACAAGCAAGGAAAGATTTTGTATATTGAAGACATGAATGAAGGCTTGGAAAGTGCTCCAGCTG CTTTCACTGGCCTTTTTTATGGCAAGAACATTGGTAAGCAAGTCATTTGTGTTACTCGTGAATGAGTGTTTTCCTAGTACAAGCCTAAAGTGACCTAATG TACAAGACTCTTACTGAATGGGGTCTGATGATAGCATCCGAGCTAAAGGATTCTTGGATTTGAATATCATACCGGTAAATTAGCTTACTCAGTTGTAAAC AAATCCAATGGAAATCTCTCTGAAGAACATGACCATCACTGCTTTACTTTCTCTTATCTTCCTTATCTATGAAAAGAATGTTAAATTTTTTGAATATGCC TAAATTATGTTGCAAGGAAAGTGTTTATTTGGATATAGCTCATGAAAATGTGGTTGTGGACTTTCGTCCACAAGTTTTCACTTGTCATTTACATAGGTTT AAATATTTTTCTAATAAAAAG
• Tissue: pods
• Gene name: LI_gene_141559;
• Additional information: details;

Expression of Ll_transcript_392436

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.2
• PS2: 0.6
• PS3: 0.2
• PW1: 0.4
• PW2: 0.9
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_392436

• Blastp: 2-alkenal reductase (NADP(+)-dependent) from Nicotiana with 72.12% of identity
• Blastx: 2-alkenal reductase (NADP(+)-dependent) from Nicotiana with 72.25% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (BAA89423)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443107.1)
• Pfam: Zinc-binding dehydrogenase (PF00107.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;