Ll_transcript_392956

• Id Trinity: TRINITY_DN45969_c1_g2_i10
• Name Transcript: Ll_transcript_392956
• Sequence: AAGTGAGGCCCATTGAGGCCCATGTTGTGAGAGTTGAGGCCCAAGAAAAGGTGGAAAGGATAGTGGCAACGGATAAGTAAGGGTGATTTCTTACTCCATT ATTATGTGACCCTCATGGCTTCTTCCCAAATCCTTCTTCAGAGGTTTGTGATACCACAAAATCCGATTTCGAAAGTGGGTTTTGTTTCTTGTTGTCCCAC CTCTCGTCTGGGTTATGGTAACACCCCCTTCACTTCAATTTCATGGAGTCACAGTATTCAGAAACATAGGGCTGGTTTTGTTGTGAGAGCTGAGTCTGAA CCCCAAGAAAATGCCCAAAATGTAGAGCAAGAAGCGCCTCCGATTGATGTTGAAGAAGAACAAGAAAAAGAAAAGGAAGTTTCAGAATCCAAGCCTGCGA GAAAACCTCGAGTGAAGCTTGGAGATATCATGGGGATACTGCATAAAAGGGCAATTGAGGCATCGGAAAAGGAGAGGGCCACTCCAGATATTAGGACCGG AGATATTGTGGAAATCAAATTGGAGGTTCCTGAGAACAAACGTAGGTTGTCAATCTATAAAGGTATTGTTATCTCAAGACAAAACTCTGGCATTCACACA ACTATTCGAATCCGAAGAATTATCGCCGGTGTTGGGGTTGAGATAGTCTTCCCAGTTTACTCACCAAACATCAAAGAAATCAAAGTAGTGAACCACCGCA AGGTCCGGAGAGCAAGATTGTACTATCTACGCCACAAGCTTCCCAGACTCTCCACTTTCAAATGAGATGCCAGTGACCCACTTTTCATCTTTGAAATGGT ATGCTGAAGTGTCAGAAGTGATTGCAGAGCCATATTTTGATTTCTTTTTTCATTTTGCTGTGTTGTAAAATATGTAAGTTTTCTTCACTTTAATTTATTC TCCTGAAATGGAAACAAGTGTAGTTGCCCTTCATAAACTTGAGAAATTCTTCTGCATTATTATTATTACACGGTAGAAAGCCAAGTTCTGAAGAAAAGTA CATGCTAATATTGCCATGTCCGAAAGGGATTATGGAGAACTTATTTGGCTTTATCATATACACATGTAAGCAAGTTTTTTTGGGAGAGATTATGAATATA AATGCTTTTTATTTGATGTCAAAAAA
• Tissue: pods
• Gene name: LI_gene_141586;
• Additional information: details;

Expression of Ll_transcript_392956

FPKM

• PAB: 45.5
• PNAB: 95.3
• PS1: 33.5
• PS2: 24.4
• PS3: 26.4
• PW1: 58.9
• PW2: 49.8
• PW3: 39.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_392956

• Blastp: 50S ribosomal protein L19-1, chloroplastic from Arabidopsis with 60.55% of identity
• Blastx: 50S ribosomal protein L19-1, chloroplastic from Arabidopsis with 60.55% of identity
• Eggnog: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (By similarity)(COG0335)
• Kegg: Link to kegg annotations (AT4G17560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445029.1)
• Pfam: Ribosomal protein L19 (PF01245.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;