| Id Trinity | TRINITY_DN45969_c1_g2_i13 |
|---|---|
| Name Transcript | Ll_transcript_392960 |
| Sequence | CCCAAGAAAGGTGAAATTGGCGAAACGGATAAGTGTGATTACTTCATCGTTGTGGCTGGTGCTGTTCTCTTCTTCCTCATATGCTGATGGCTTCTTCCCA ACTCCTTCTTCAGCAGTTTGCGATACCACAATACTCCAACCTATGTTCCCCTCCCATTGCGAAGTTGAGTTTTGTATCCTCTTGTAGCACCTCTCGCAAC ATTCCCTTCACCTCAATTTCATGGAGTCACAGTGTTCAAAAACATAAGCCTCATTTTGTAGTTAGAGCTGAGTCTCAACCCCAAGAAACTACCGAAAATG TTGAAGAAGAAGAAGAAGAAAAAGAAGAACAAGTTTCGGAACCCAAGCCAGCAAGACAGCCTCGTGTCAAGCTTGGAGACATAATGGGGATTTTGCATAA GAGGGCAATTGAGGCATCAGAAAAGGAGAGGGCTACTCCGGATATTAGGACCGGAGATATTGTGGAAATCAAATTGGAGGTTCCTGAGAACAAACGTAGG TTGTCAATCTATAAAGGTATTGTTATCTCAAGACAAAACTCTGGCATTCACACAACTATTCGAATCCGAAGAATTATCGCCGGTGTTGGGGTTGAGATAG TCTTCCCAGTGTAAGTTTCCTCCTTTTTGGAACTTAATATTTAGAGACTGTTCATGTCATTTGTACTAGTCAATGTTTCTTTTGGCTGTGTTTCTGTGTA CGCAATTGTTATAGTGGGATATATAAGCTTGAAAGAGAGACAGAAATTTGGGGTTAATATTGCTTTCTTCATTTTCACTTCATGTTTAAGTGGCATTACA TCATTAAAAACATGATATCATTTGGGGGAGAGGGGAAATTAAGTCAACTACTACCACGTATAATACCTATATTATGTTGTTGACAATGTGCTACTACTGG TAATTGTGCACCTTTTGAAAGCTCAAATTGTTTAGAAATTGGTTGAGGACTAGGAGGACTCAAGCTAACCTTGTTCTAGAATCCGTACGCATCTCAGATT GTTACAAATTTGGATTCACTTATTTCCATTTCAGTGTTGTAACTTGTAAGAAAATTAGAAAAGCATCTCCTCTACCATTCTGTAATGTTGGGAAGCCAAC CTGAATCTGAACTCTGAAAATATCTCTCCTCTCTTTAAGTATGGAGGGTGAGATTTCCGTATATGTTTCAAGGTGTAACCTGATAAAAGCAATGTTTGTC TGCATAATTCTTGTCTTAAGTCTATGTTGTATAATAAAAATTTATGAAATCAATATTAAGATTGAAATTTATTTATCAAAGTAGCCAAATGCTTCACTCA TTATGTTACTGATTGATGGTTAAGATCAAAGTATTTTTCATATCCCTCTGCTATGATGCTTATTTTCCCTGCCACAGTTACTCACCAAACATCAAAGAAA TCAAAGTAGTGAACCACCGCAAGGTCCGGAGAGCAAGATTGTACTATCTACGCCACAAGCTTCCCAGACTCTCCACTTTCAAATGAGATGCCAGTGACCC ACTTTTCATCTTTGAAATGGTATGCTGAAGTGTCAGAAGTGATTGCAGAGCCATATTTTGATTTCTTTTTTCATTTTGCTGTGTTGTAAAATATGTAAGT TTTCTTCACTTTAATTTATTCTCCTGAAATGGAAACAAGTGTAGTTGCCCTTCATAAACTTGAGAAATTCTTCTGCATTATTATTATTACACGGTAGAAA GCCAAGTTCTGAAGAAAAGTACATGCTAATATTGCCATGTCCGAAAGGGATTATGGAGAACTTATTTGGCTTTATCATATACACATGTAAGCAAGTTTTT TTGGGAGAGATTATGAATATAAATGCTTTTTATTTGATGTCAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_141586; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_392960
| Blastp | 50S ribosomal protein L19, chloroplastic from Spinacia with 51.01% of identity |
|---|---|
| Blastx | 50S ribosomal protein L19-1, chloroplastic from Arabidopsis with 80.68% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421813.1) |
| Pfam | Ribosomal protein L19 (PF01245.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |