Ll_transcript_392967

• Id Trinity: TRINITY_DN45969_c1_g2_i19
• Name Transcript: Ll_transcript_392967
• Sequence: AAGTGAGGCCCATTGAGGCCCATGTTGTGAGAGTTGAGGCCCAAGAAAAGGTGGAAAGGATAGTGGCAACGGATAAGTAAGGGTGATTTCTTACTCCATT ATTATGTGACCCTCATGGCTTCTTCCCAAATCCTTCTTCAGGTTTTCTGCTCTATCAAATACTTCCTTATTGTTATTATTATTTAGCATTTACAACTTTG GTTTATGTATGTATTAATTTGGGAAAATTGCAATGACAGAGGTTTGTGATACCACAAAATCCGATTTCGAAAGTGGGTTTTGTTTCTTGTTGTCCCACCT CTCGTCTGGGTTATGGTAACACCCCCTTCACTTCAATTTCATGGAGTCACAGTATTCAGAAACATAGGGCTGGTTTTGTTGTGAGAGCTGAGTCTGAACC CCAAGAAAATGCCCAAAATGTAGAGCAAGAAGCGCCTCCGATTGATGTTGAAGAAGAACAAGAAAAAGAAAAGGAAGTTTCAGAATCCAAGCCTGCGAGA AAACCTCGAGTGAAGCTTGGAGATATCATGGGGATACTGCATAAAAGGGCAATTGAGGCATCGGAAAAGGAGAGGGCCACTCCAGATATTAGGACCGGAG ATATTGTGGAAATCAAATTGGAGGTTCCTGAGAACAAACGTAGGTTGTCAATCTATAAAGGTATTGTTATCTCAAGACAAAACTCTGGCATTCACACAAC TATTCGAATCCGAAGAATTATCGCCGGTGTTGGGGTTGAGATAGTCTTCCCAGTGTAAGTTTCCTCCTTTTTGGAACTTAATATTTAGAGACTGTTCATG TCATTTGTACTAGTCAATGTTTCTTTTGGCTGTGTTTCTGTGTACGCAATTGTTATAGTGGGATATATAAGCTTGAAAGAGAGACAGAAATTTGGGGTTA ATATTGCTTTCTTCATTTTCACTTCATGTTTAAGTGGCATTACATCATTAAAAACATGATATCATTTGGGGGAGAGGGGAAATTAAGTCAACTACTACCA CGTATAATACCTATATTATGTTGTTGACAATGTGCTACTACTGGTAATTGTGCACCTTTTGAAAGCTCAAATTGTTTAGAAATTGGTTGAGGACTAGGAG GACTCAAGCTAACCTTGTTCTAGAATCCGTACGCATCTCAGATTGTTACAAATTTGGATTCACTTATTTCCATTTCAGTGTTGTAACTTGTAAGAAAATT AGAAAAGCATCTCCTCTACCATTCTGTAATGTTGGGAAGCCAACCTGAATCTGAACTCTGAAAATATCTCTCCTCTCTTTAAGTATGGAGGGTGAGATTT CCGTATATGTTTCAAGGTGTAACCTGATAAAAGCAATGTTTGTCTGCATAATTCTTGTCTTAAGTCTATGTTGTATAATAAAAATTTATGAAATCAATAT TAAGATTGAAATTTATTTATCAAAGTAGCCAAATGCTTCACTCATTATGTTACTGATTGATGGTTAAGATCAAAGTATTTTTCATATCCCTCTGCTATGA TGCTTATTTTCCCTGCCACAGTTACTCACCAAACATCAAAGAAATCAAAGTAGTGAACCACCGCAAGGTCCGGAGAGCAAGATTGTACTATCTACGCCAC AAGCTTCCCAGACTCTCCACTTTCAAATGAGATGCCAGTGACCCACTTTTCATCTTTGAAATGGTATGCTGAAGTGTCAGAAGTGATTGCAGAGCCATAT TTTGATTTCTTTTTTCATTTTGCTGTGTTGTAAAATATGTAAGTTTTCTTCACTTTAATTTATTCTCCTGAAATGGAAACAAGTGTAGTTGCCCTTCATA AACTTGAGAAATTCTTCTGCATTATTATTATTACACGGTAGAAAGCCAAGTTCTGAAGAAAAGTACATGCTAATATTGCCATGTCCGAAAGGGATTATGG AGAACTTATTTGGCTTTATCATATACACATGTAAGCAAGTTTTTTTGGGAGAGATTATGAATATAAATGCTTTTTATTTGATGTCAAAAAA
• Tissue: pods
• Gene name: LI_gene_141586;
• Additional information: -

Expression of Ll_transcript_392967

FPKM

• PAB: 1.1
• PNAB: 1
• PS1: 1.1
• PS2: 0.7
• PS3: 1.5
• PW1: 0
• PW2: 1.8
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_392967

• Blastp: -
• Blastx: 50S ribosomal protein L19-1, chloroplastic from Arabidopsis with 54.1% of identity
• Eggnog: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (By similarity)(COG0335)
• Kegg: Link to kegg annotations (AT4G17560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445029.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;