Ll_transcript_392948

• Id Trinity: TRINITY_DN45969_c1_g2_i4
• Name Transcript: Ll_transcript_392948
• Sequence: AAGTGAGGCCCATTGAGGCCCATGTTGTGAGAGTTGAGGCCCAAGAAAAGGTGGAAAGGATAGTGGCAACGGATAAGTAAGGGTGATTTCTTACTCCATT ATTATGTGACCCTCATGGCTTCTTCCCAAATCCTTCTTCAGAGGTTTGTGATACCACAAAATCCGATTTCGAAAGTGGGTTTTGTTTCTTGTTGTCCCAC CTCTCGTCTGGGTTATGGTAACACCCCCTTCACTTCAATTTCATGGAGTCACAGTATTCAGAAACATAGGGCTGGTTTTGTTGTGAGAGCTGAGTCTGAA CCCCAAGAAAATGCCCAAAATGTAGAGCAAGAAGCGCCTCCGATTGATGTTGAAGAAGAACAAGAAAAAGAAAAGGAAGTTTCAGAATCCAAGCCTGCGA GAAAACCTCGAGTGAAGCTTGGAGATATCATGGGGATACTGCATAAAAGGGCAATTGAGGCATCGGAAAAGGAGAGGGCCACTCCAGATATTAGGACCGG AGATATTGTGGAAATCAAATTGGAGGTTCCTGAGAACAAACGTAGGTTGTCAATCTATAAAGGTATTGTTATCTCAAGACAAAACTCTGGCATTCACACA ACTATTCGAATCCGAAGAATTATCGCCGGTGTTGGGGTTGAGATAGTCTTCCCAGTGTAAGTTTCCTCCTTTTTGGAACTTAATATTTAGAGACTGTTCA TGTCATTTGTACTAGTCAATGTTTCTTTTGGCTGTGTTTCTGTGTACGCAATTGTTATAGTGGGATATATAAGCTTGAAAGAGAGACAGAAATTTGGGGT TAATATTGCTTTCTTCATTTTCACTTCATGTTTAAGTGGCATTACATCATTAAAAACATGATATCATTTGGGGGAGAGGGGAAATTAAGTCAACTACTAC CACGTATAATACCTATATTATGTTGTTGACAATGTGCTACTACTGGTAATTGTGCACCTTTTGAAAGCTCAAATTGTTTAGAAATTGGTTGAGGACTAGG AGGACTCAAGCTAACCTTGTTCTAGAATCCGTACGCATCTCAGATTGTTACAAATTTGGATTCACTTATTTCCATTTCAGTGTTGTAACTTGTAAGAAAA TTAGAAAAGCATCTCCTCTACCATTCTGTAATGTTGGGAAGCCAACCTGAATCTGAACTCTGAAAATATCTCTCCTCTCTTTAAGTATGGAGGGTGAGAT TTCCGTATATGTTTCAAGGTGTAACCTGATAAAAGCAATGTTTGTCTGCATAATTCTTGTCTTAAGTCTATGTTGTATAATAAAAATTTATGAAATCAAT ATTAAGATTGAAATTTATTTATCAAAGTAGCCAAATGCTTCACTCATTATGTTACTGATTGATGGTTAAGATCAAAGTATTTTTCATATCCCTCTGCTAT GATGCTTATTTTCCCTGCCACAGTTACTCACCAAACATCAAAGAAATCAAAGTAGTGAACCACCGCAAGGTCCGGAGAGCAAGATTGTACTATCTACGCC ACAAGCTTCCCAGACTCTCCACTTTCAAATGAGATGCCAGTGACCCACTTTTCATCTTTGAAATGGTATGCTGAAGTGTCAGAAGTGATTGCAGAGCCAT ATTTTGATTTCTTTTTTCATTTTGCTGTGTTGTAAAATATGTAAGTTTTCTTCACTTTAATTTATTCTCCTGAAATGGAAACAAGTGTAGTTGCCCTTCA TAAACTTGAGAAATTCTTCTGCATTATTATTATTACACGGTAGAAAGCCAAGTTCTGAAGAAAAGTACATGCTAATATTGCCATGTCCGAAAGGGATTAT GGAGAACTTATTTGGCTTTATCATATACACATGTAAGCAAGTTTTTTTGGGAGAGATTATGAATATAAATGCTTTTTATTTGATGTCAAAAAA
• Tissue: pods
• Gene name: LI_gene_141586;
• Additional information: details;

Expression of Ll_transcript_392948

FPKM

• PAB: 2.2
• PNAB: 2.7
• PS1: 0.7
• PS2: 0
• PS3: 0.1
• PW1: 1.2
• PW2: 0
• PW3: 2.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_392948

• Blastp: 50S ribosomal protein L19, chloroplastic from Spinacia with 62.96% of identity
• Blastx: 50S ribosomal protein L19-1, chloroplastic from Arabidopsis with 54.1% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445029.1)
• Pfam: Ribosomal protein L19 (PF01245.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;