Id Trinity | TRINITY_DN45969_c1_g2_i9 |
---|---|
Name Transcript | Ll_transcript_392955 |
Sequence | CCCAAGAAAGGTGAAATTGGCGAAACGGATAAGTGTGATTACTTCATCGTTGTGGCTGGTGCTGTTCTCTTCTTCCTCATATGCTGATGGCTTCTTCCCA ACTCCTTCTTCAGCAGTTTGCGATACCACAATACTCCAACCTATGTTCCCCTCCCATTGCGAAGTTGAGTTTTGTATCCTCTTGTAGCACCTCTCGCAAC ATTCCCTTCACCTCAATTTCATGGAGTCACAGTGTTCAAAAACATAAGCCTCATTTTGTAGTTAGAGCTGAGTCTCAACCCCAAGAAACTACCGAAAATG TTGAAGAAGAAGAAGAAGAAAAAGAAGAACAAGTTTCGGAACCCAAGCCAGCAAGACAGCCTCGTGTCAAGCTTGGAGACATAATGGGGATTTTGCATAA GAGGGCAATTGAGGCATCAGAAAAGGAGAGGGCTACTCCGGATATTAGGACCGGAGATATTGTGGAAATCAAATTGGAGGTTCCTGAGAACAAGAGAAGG TTATCCATCTATAAAGGTATTGTTATCTCAAGACAAAACTCTGGCATTCACACAACTATTCGAATCCGAAGAATTATCGCCGGTGTTGGGGTTGAGATAG TCTTCCCAATTTACTCTCCAAACATCAAACAAATCAAAGTAGTGAGCCACCGTAAAGTTCGGAGGGCAAGATTGTACTATCTACGCGACAAGCTTCCCAG ACTGTCCACTTTCAAATGAGATGCTAGTTACCCACTTTTCATATTCTAAGTTGTATGTTGAAGGAAGTGGCAGAAGTGATTGCAGGGCCATATTTTGTTT GTTTCGTTTTGTTGTGTTGTAGAGTATGTAATTTTTATTCATCTCAATGTATTCTCCGTGATATGAAAACAAGTGTAGTTGCCCTGGGTCAACTTGAGAA ATTTGATGTTTCTTCTGAATTATTCTGTAATTATTTTATGGTCGAGAGCCAAATACTGAAGAAAATAGTGCATCGCTAACGTTGCCATGTCCGAAGAGTT TATATGGAGAACTTATTTGGTTTTATCATATATACGTGTTATTTGGAAGTGTTTAT BLAST |
Tissue | pods |
Gene name | LI_gene_141586; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_392955
Blastp | 50S ribosomal protein L19, chloroplastic from Spinacia with 57.51% of identity |
---|---|
Blastx | 50S ribosomal protein L19-1, chloroplastic from Arabidopsis with 86.18% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421813.1) |
Pfam | Ribosomal protein L19 (PF01245.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |