Ll_transcript_392958

• Id Trinity: TRINITY_DN45969_c1_g3_i2
• Name Transcript: Ll_transcript_392958
• Sequence: CATAAAACGAAAAACAAATCCCATTATCTCCAATATTTAGAAGAAGAAGAAAAAGAAGAACAGGGTGGTATCTATCTGTGACAGAATCAAAAAACCAAAC ATAAATTGTTATAATTGATGTTACCACCCTCAACCTTCTCAAACCCAATCCATACACACACAGATATCAAAGTTCTAACCTTTATTGGGTTTTCCACTTT TTTTTTTCTTCTTCTTCTATTTTGTTGAATAAAAGGGGTTGATATAATTTTTATTATTCATATACCCAATTAATAAAAATATAAACTTGCATTTCTTTCT GTTATTTGGGCTCTTCACAATGTCTGAAGGGTATTATAATTCCAAAAAGACCGATGATATATGCAATGATGTTTGTGGCGAGGGAACTCGTGCAGCATTG AGTATGTCAAGAATCAAATGTATCTTGCGAGGATTGGACTTGAAGACTTTTATATTTATATTTGTAGTTGTTCCTATGAGCATCTTAGGTCTCTACGTGC ACGGCCAGAAAATCACATACTTTCTGAGACCACTCTGGGAATCTCCCCCGAAGCCGTTTCACGAAATCCCTCACTATTATCATGAGAATGTGTCAATGCA GACTCTCTGCAAACTACATGGGTGGGGAATCCGTGAATCACCAAGGCGAGTCTTTGACGCTGTTTTGTTTAACAACGAAGTTGACCTGCTTACAATTCGC TGGAACGAAATGCATCCTTTTGTGACGCAATATGTGCTCCTGGAATCAAACTCGACATTTACAGGAATCGTCAAACCATTGTTTTATGCAAACAATAGGG ACCAGTTCAAGTTTGTTGAGTCCCGACTGACGTATGGTTTGATCGGAGGAAGATTTAAGAAACACGAAAACCCTTTTGTCGAAGAGGCGTATCAAAGAGT GGCACTCGACCAGCTTCTGAGGATAGCAGGCATAGAAGACGATGATCTCTTGATAATGTCTGATGTTGACGAGATTCCTAGTGCTCACACGATTAATCTC TTGAGGTGGTGTGATGACATTCCCCCTGTTCTTCATCTTCAGTTGAGGAACTACTTATACTCTTTCGAGTTCTTTCAGGACACCGAAAGTTGGAGAGCAT CGATGCACAGGTACCAGACAGGCAAGACAAGGTACGCACACTACAGACAGTCCGATGTATTGTTGTCCGATGCTGGTTGGCATTGTAGCTTCTGTTTCCG TTATATCAGCGACTTCATATTTAAGATGAAAGCTTACAGCCATAATGATCGGATCCGGTTCGCTCATTACTTGAACCCGGATAGGATTCAGGATGTGATA TGCAAAGGAGCTGACTTATTCGACATGCTCCCGGAAGAGTATACATTTAAGGAGATCATAGGGAAGATGGGACCTATTCCGCATTCTTATTCGGCAGTAC ATCTTCCAGCATATTTATTGAACAACGCCGATAAATACAGATTCTTGTTGCCGGGTAACTGCAAAAGAAAAAGTGACTAACTTTGAAGATGCATTCCTTC AATGTTGTAGAGGCATGAGTGTAGGTCATTCTTTAGAAGGATATTGAAAAATAGTTTGATGCTATTTGAAGATTTGATATGAAAATTCAATTACATGGGG TTTGAAAATGTGAGATTCCTAAGTGAGATGTTTTGAGGGAAATAGTATTTTGTAATTTGTCTTTGGGTATTTATATGTATAGACCTTAACTTGGCTAATG TTAGAGCATGATATTTCCCAACCTTTTCTAATGGGAATTTTGATTATATGGACTAAGTATTATTACATATAATTCTAACTCG
• Tissue: pods
• Gene name: LI_gene_141587;
• Additional information: details;

Expression of Ll_transcript_392958

FPKM

• PAB: 3.7
• PNAB: 2.6
• PS1: 5.6
• PS2: 8.5
• PS3: 12.6
• PW1: 3.4
• PW2: 4.4
• PW3: 10.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_392958

• Blastp: Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase from Rattus with 27.8% of identity
• Blastx: Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase from Rattus with 27.8% of identity
• Eggnog: Glycosyl transferase family 17 protein(ENOG410YQKP)
• Kegg: Link to kegg annotations (29582)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447453.1)
• Pfam: Glycosyltransferase family 17 (PF04724.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;