Ll_transcript_393276

• Id Trinity: TRINITY_DN45971_c0_g1_i2
• Name Transcript: Ll_transcript_393276
• Sequence: CTTCTAGCTAGCTTATAAGTTAGTTGTGTCAAACAGAGCTCATGTAGATGGGTTGTTAACTATTTGGCAAGTAGGTTCTGTGCCTTGTGCATACGATCTT CCAGGATCAGGAACAACCTTATATAGTTCTTGATATATTATTTTTCATGGCAGCATTTCATCCTGCTATAATTTGCTCGTGCTCAAATTCAAAAAATAAT CCCTGCACTTGTGTGAATTTGATACTCCCTTTAATGTCATCATTTTTGTAACCTATTTGTTTAATAGTTACTAATGCAGATGATGCTATCAGCAGAAGTA AATCCACTTCAGTTGAAGAGATTTTGTTTGTACTTCCCGTCATCAACCTTATGTCATCTCCTTCAAAATCTGTGAAAGGATTGGCTATTGATTTCCTTCT TCTCTTAGAGAAGCTCCTTGTAAAGATGATTGCGGTGCCGACAGATAAACTAGTCGTTGAGGATGGAGTTCATTATCTTAGCACACCAGGAATTATAGTT TCAAGAACTCTGCGACTTCTGTGGTATCAGGATGTAGAATCTTCTTCCAGAATTTCCCTTCTGAATTTCGCTCCAAATGGCCTTAGTGATGGCGAAAGGA TGCATGGTCAATCAATATCTTGGGTTTCTCAAGTAAGAGGGTTTTGTTTGTCAATTATTGACCAACGAAAATCTTCCTTACCTCTCACACATTTTCAGGA AGTATTTTTTAATGAGATGCCCTCGTTACTCACTGCTGTTATTGGTGTCTTATTGATACATCCATCAATGGGGGCTGCTGCTGTCAATTCTTTATCTTCC ATGGCTATTATGGATCCCAAACTGGGGGTTCCTTTGTTGCTAACAATTATGTTTTACAGTAATATATTCATAAGAAAAGATGTCGTTAGACATGATATGC TGCTAAAGATTTTTGAAATGTTGCCATCACTTGCTTCACACTCAGCAATGGTTCCACTTGTAGTTCAAACTATCTTGCCAATGCTTTACAAAGATGCAAA AGTCTCATTATATTCTACAGCCACTCGATTGCTATGTCAGACTTGGGAGACCAATGACCGAGCTTTTACAAGTTTGCAAGGTGTGTTGCTTCCTAAAGGG TTCACGGATTTCAAGTCAGATAGAGCTATCTGTATCAGCATGGCTGCTTCCATTCGAGATGTTTGCCATAAAAGCCCTGATAGGGGTGTTGACCTTATCT TATCCGTTTCGTCTTGCATTGAGAGCCAAGATCCTGTAATTAAAGCTCTTGGCTTACAAAGCCTTGCCCACCTTTGTGAAGCAGATGTCATTGATTTTTA CACTGCATGGGATGTCATTGCAAAGCATCTGCAAGGTTACCATGCTGATCCTATTATTGCACATAGCATTTGCCTTCTACTAAGGTGGGGTGCAATGGAT GCAGAAGCATATCCTGAAGCATCAAAAGGTGTGGTGCAAATTATATGGGATGTAGTTACTTCTAATCAAGACATACAGTGGGCAAAAGCAAGAATTTCAG CCATTGAGGCACTCACCCAATATGAAGTATCACAGCTTGAAAAAAGCATTCCAGATTTTAAGAAAAGGAATTTGGAGTTGTTATTTTCTGAGAAAAATTC TGAAATACTGAAGGTTATGGAAGATTTTCAAGTCAAGATAGTAACACACGAGCATATAAATCGCCGAAGATTAGTAAAGGAGAAAAGAGTTACAACAGGA AGTAAAATTGAAAAGTTGATGGCTGTGTTCCCCCAGGTTATATTCTCTTCAGGGAAGGTAAATGAAGCTAGAGAATTGCCCGGTGCAGCTTTGTTATGTT TCACTCTTACTCATAAAGATGTGGATGAACTTCAGGCATCAAAAAGGATGAGAGATGTACATGCTGGGTATGAGAACACTCTGGTGGAAATAGCTTCTTC TCTTCAGCTCTCAAGAAATATCTTGCTTGCACTTATGGCGTTCCAATCATGGAAAGGCTTCATGCGACGTTGGATGAAGGCTGACATTCAATCCTACGAA GCTAAAGCACAATCAAGTGTCCAGGACAAAACTTCTAAAGCTGCGAGTAATATTCTAAAGAGTGTGGTAGCAATAGCAGATGAAGCTATACCTAGAGCTG CTGAGAACATTGCACTGGCTATTGGTGCACTCTGTGTGGTTTTACCTCCATCTGTTCATACTGTTAAATCTGCTGCTTCAAAATTTCTTTTAGAGTGGTT GCTCCAACACGAACACGAACACCGTCAATGGTCTTCGGCAATCTCTCTTGGATTAATCTCAAGTTGCCTTCATGTTACCGATCATAGACAGAGATATCAT AACATCACAGGACTTCTTGAGGTTCTTTTTGTTAGCAAAAGTTCACTTGTAAAAGGAGCATGTGGTGTTGGATTGGGTTTTTCATGTCAAGATCTTCTTA CCAGGGTTGAAGCTGCTGATGACTCTGCTGTTGAAAAAGAAAAGGACAAGGTTCCAGAATCTGAATTACTTGGAAGAATTGTTAGGGCCTTGGCTACTAT GCTACATGATAGAACTCAATCATCCTCTGATGTTTTGGATAGTCTATGTTCATGCTTTCCACCTGATTCATATGATATGAATGCTAAAGTATTTGAACCA TTCTCTGAGAACAATGAAGACTTGGAAGAAGATATATGGGGTGTCGCTGGACTTGTTCTTGGTTTGGCTACCTCCATCAGTGCAATATACAGAGCGGGAG AGTTAGAGGCTGTTATCATGATAAAAAAATTAGTAATATCATGGCTTCCATATGCAAATTCTCTACTTCAAGGCAGTAATTTCCTAGGGGAGGAATCCGA TACTGTTTTAGCGATAGGTTCCTGTATTGCACTTCCCACAATATTGACTTTTTGCCAGAGAATGGAATTGATGGATGGTATTGAGTTGGACAACATTGTA GCCAGCTTTAAAGAGTTGATTTCTGAGTTAATCTCTATGAAAAAGTCTGGCATTTTGCACCAGAGTTTGCTTATGGCATCATGCGTTGGTGCAGGGACAG TAATTTCCTGCATACTGAATGAAGGTGTTCATTCTATTGAGGTTGACTGTGTTAATGGTTTGCTGGAACTGTTCAAGACATGTTACTCCAATCCTTTTCC TTCTCTTGTTCATCTGGGTGGTATGCTAGGAGTTGTGAATGCTATGGGAGCAGGGGCAGGGATTTTGGCGAATATGAATTTTCCAAATTACACTAAGCAT TCTTGTTATGAGAAGAAGGAATATTCTTCTGTTACCGGTCCTCTCCTAACAGTTTCAGTCTTTGAACCATACTTGACATCATTGGTGCAAGAGATGTTTC TTGTGGCACAGAATTCTGATCATCATCAGCTACAACAGTTTGCTTCTTGGGCACTCACCTTCCTTCGGCAACATTTATGGTCCAAGGAACATTTGAGTGT TGATGGTGATAGTAATGTGGCGGAAACTAATTCAAAATCTGTTTCTCACAGTTTTTCTGAAGAGAATATGGTTGTGAAACTCAGTTTGTGGCTTATGGAT ATCCAGTACACTGAGCTGGGCTCTACAGCACATGTCAGCACAGTTATTGCTACATTACGGTGCCTTTCTAGAGCTCCCAGGTTGCCAAATTTGGATTGGG GAGCAATTATTAGGCGTTGTATGAGGCATGAGGCTAATTGTGCTGAGTTACCGCCAACATATTCTGCTTTTAAGAAAGGGACCCTCAGGGAGGAATGCAT ACAGTTCGCATTAGCTCATGCTAGTCAATTTGATTCACTCCTAACTTTTCTTGATGAGCTATCAGACTTTTCCAGGTTCAAGACACTTGAATTAAATCTG CAGTCATGTCTGCTAATTCATCTGGCAGACCTTGCAAAAGTATATTCAAGCTCTAGGCTTGAGAAACTATTTGGAGATGTGACTAATCACTTGTCTTCAT TTACTTCCTACGACGAGTCGAAAAGCTTGTTATGTATCTCATGCTGGAAAGGTCTCTATGAGTGCCTACATGAAGTTTCTGTGGACACTTCTGATCACAT ATCCCATGTTGAGAGGTGCATGCAGGCTCTATTTACTTTATTACCAGTTACGCAATCTTCTGGCGTTGTAGTGTCAGGGGATGTAAGTTCTGTAGAGGAG TGGTCTGAGGCTCTAAAATGCTTAGGAAAGGCTCGTCAGAGTTGGTTATTGGATTTCCTAAAGGTTTCACATTACGAGTTTGGTCAAAGTGCTGACGATG CTGTTGAAATACAAAAAAAGGTTTGTGCTAAAATCAAGCTGGTGAAGGCTGGTTCTCTTCCTCTAATTGAACTCGGAAAAATGAAATCATACATATTAAA CTCCAAATCACAAGGTTAGTTTTCTGAGGAATACTTTTTTGGACACAGTACCTTGAATAAATATGGGTTAAAACAATTATTGGTTCTTAATTGTGCACCG GTTGGATCTTAGAAGCATATTCAGATGGAAATGCTTTGCATGTCTAATGCCAATGCTAAAGATTTTAGTCTTTGTAGGACTTTGGGATGTACTGGTTGAA GTTGTTGCAGCTTTGCATCATGCAGAGGGAAGTGTCAAAAGACAGTGGCTTATGGATGCAGTTGAAATTAGCTGTGTATCCGCTGTTCCTTCCACGGCAC TGCAGTTTCTCGGTCTTCTATCTGCTACCTGCTGCAAATATATGCCTTTTATGATAGTGGACCAACAGACCGTACTGAATGATCTTCCGGTCACTCTTGT GTCTCTTCTAGAAGACAAAAACTGGGATAATGTTGCAGAAACTATTGTTTCCCTTCTCTTTTCATCGACAGAACGGATATACCACTGGGTTATGCAACTA GCAGATGGTTCTTATGTTCCTGACTCACAGCCCATTGATGAAAGTGAGAATCATATGGCTCCTTTTTT
• Tissue: pods
• Gene name: LI_gene_141598;
• Additional information: details;

Expression of Ll_transcript_393276

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.2
• PS3: 0.3
• PW1: 0.1
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_393276

• Blastp: Protein RST1 from Arabidopsis with 50.76% of identity
• Blastx: Protein RST1 from Arabidopsis with 50.11% of identity
• Eggnog: Protein of unknown function (DUF3730)(ENOG410Z8CX)
• Kegg: Link to kegg annotations (AT3G27670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448329.1)
• Pfam: Protein of unknown function (DUF3730) (PF12530.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;