Ll_transcript_393278

• Id Trinity: TRINITY_DN45971_c0_g1_i4
• Name Transcript: Ll_transcript_393278
• Sequence: CTTCTAGCTAGCTTATAAGTTAGTTGTGTCAAACAGAGCTCATGTAGATGGGTTGTTAACTATTTGGCAAGTAGGTTCTGTGCCTTGTGCATACGATCTT CCAGGATCAGGAACAACCTTATATAGTTCTTGATATATTATTTTTCATGGCAGCATTTCATCCTGCTATAATTTGCTCGTGCTCAAATTCAAAAAATAAT CCCTGCACTTGTGTGAATTTGATACTCCCTTTAATGTCATCATTTTTGTAACCTATTTGTTTAATAGTTACTAATGCAGATGATGCTATCAGCAGAAGTA AATCCACTTCAGTTGAAGAGATTTTGTTTGTACTTCCCGTCATCAACCTTATGTCATCTCCTTCAAAATCTGTGAAAGGATTGGCTATTGATTTCCTTCT TCTCTTAGAGAAGCTCCTTGTAAAGATGATTGCGGTGCCGACAGATAAACTAGTCGTTGAGGATGGAGTTCATTATCTTAGCACACCAGGAATTATAGTT TCAAGAACTCTGCGACTTCTGTGGTATCAGGATGTAGAATCTTCTTCCAGAATTTCCCTTCTGAATTTCGCTCCAAATGGCCTTAGTGATGGCGAAAGGA TGCATGGTCAATCAATATCTTGGGTTTCTCAAGTAAGAGGGTTTTGTTTGTCAATTATTGACCAACGAAAATCTTCCTTACCTCTCACACATTTTCAGGA AGTATTTTTTAATGAGATGCCCTCGTTACTCACTGCTGTTATTGGTGTCTTATTGATACATCCATCAATGGGGGCTGCTGCTGTCAATTCTTTATCTTCC ATGGCTATTATGGATCCCAAACTGGGGGTTCCTTTGTTGCTAACAATTATGTTTTACAGTAATATATTCATAAGAAAAGATGTCGTTAGACATGATATGC TGCTAAAGATTTTTGAAATGTTGCCATCACTTGCTTCACACTCAGCAATGGTTCCACTTGTAGTTCAAACTATCTTGCCAATGCTTTACAAAGATGCAAA AGTCTCATTATATTCTACAGCCACTCGATTGCTATGTCAGACTTGGGAGACCAATGACCGAGCTTTTACAAGTTTGCAAGGTGTGTTGCTTCCTAAAGGG TTCACGGATTTCAAGTCAGATAGAGCTATCTGTATCAGCATGGCTGCTTCCATTCGAGATGTTTGCCATAAAAGCCCTGATAGGGGTGTTGACCTTATCT TATCCGTTTCGTCTTGCATTGAGAGCCAAGATCCTGTAATTAAAGCTCTTGGCTTACAAAGCCTTGCCCACCTTTGTGAAGCAGATGTCATTGATTTTTA CACTGCATGGGATGTCATTGCAAAGCATCTGCAAGGTTACCATGCTGATCCTATTATTGCACATAGCATTTGCCTTCTACTAAGGTGGGGTGCAATGGAT GCAGAAGCATATCCTGAAGCATCAAAAGGTGTGGTGCAAATTATATGGGATGTAGTTACTTCTAATCAAGACATACAGTGGGCAAAAGCAAGAATTTCAG CCATTGAGGCACTCACCCAATATGAAGTATCACAGCTTGAAAAAAGCATTCCAGATTTTAAGAAAAGGAATTTGGAGTTGTTATTTTCTGAGAAAAATTC TGAAATACTGAAGGTTATGGAAGATTTTCAAGTCAAGATAGTAACACACGAGCATATAAATCGCCGAAGATTAGTAAAGGAGAAAAGAGTTACAACAGGA AGTAAAATTGAAAAGTTGATGGCTGTGTTCCCCCAGGTTATATTCTCTTCAGGGAAGGTAAATGAAGCTAGAGAATTGCCCGGTGCAGCTTTGTTATGTT TCACTCTTACTCATAAAGATGTGGATGAACTTCAGGCATCAAAAAGGATGAGAGATGTACATGCTGGGTATGAGAACACTCTGGTGGAAATAGCTTCTTC TCTTCAGCTCTCAAGAAATATCTTGCTTGCACTTATGGCGTTCCAATCATGGAAAGGCTTCATGCGACGTTGGATGAAGGCTGACATTCAATCCTACGAA GCTAAAGCACAATCAAGTGTCCAGGACAAAACTTCTAAAGCTGCGAAGTGTGGTAGCAATAGCAGATGAAGCTATACCTAGAGCTGCTGAGAACATTGCA CTGGCTATTGGTGCACTCTGTGTGGTTTTACCTCCATCTGTTCATACTGTTAAATCTGCTGCTTCAAAATTTCTTTTAGAGTGGTTGCTCCAACACGAAC ACGAACACCGTCAATGGTCTTCGGCAATCTCTCTTGGATTAATCTCAAGTTGCCTTCATGTTACCGATCATAGACAGAGATATCATAACATCACAGGACT TCTTGAGGTTCTTTTTGTTAGCAAAAGTTCACTTGTAAAAGGAGCATGTGGTGTTGGATTGGGTTTTTCATGTCAAGATCTTCTTACCAGGGTTGAAGCT GCTGATGACTCTGCTGTTGAAAAAGAAAAGGACAAGGTTCCAGAATCTGAATTACTTGGAAGAATTGTTAGGGCCTTGGCTACTATGCTACATGATAGAA CTCAATCATCCTCTGATGTTTTGGATAGTCTATGTTCATGCTTTCCACCTGATTCATATGATATGAATGCTAAAGTATTTGAACCATTCTCTGAGAACAA TGAAGACTTGGAAGAAGATATATGGGGTGTCGCTGGACTTGTTCTTGGTTTGGCTACCTCCATCAGTGCAATATACAGAGCGGGAGAGTTAGAGGCTGTT ATCATGATAAAAAAATTAGTAATATCATGGCTTCCATATGCAAATTCTCTACTTCAAGGCAGTAATTTCCTAGGGGAGGAATCCGATACTGTTTTAGCGA TAGGTTCCTGTATTGCACTTCCCACAATATTGACTTTTTGCCAGAGAATGGAATTGATGGATGGTATTGAGTTGGACAACATTGTAGCCAGCTTTAAAGA GTTGATTTCTGAGTTAATCTCTATGAAAAAGTCTGGCATTTTGCACCAGAGTTTGCTTATGGCATCATGCGTTGGTGCAGGGACAGTAATTTCCTGCATA CTGAATGAAGGTGTTCATTCTATTGAGGTTGACTGTGTTAATGGTTTGCTGGAACTGTTCAAGACATGTTACTCCAATCCTTTTCCTTCTCTTGTTCATC TGGGTGGTATGCTAGGAGTTGTGAATGCTATGGGAGCAGGGGCAGGGATTTTGGCGAATATGAATTTTCCAAATTACACTAAGCATTCTTGTTATGAGAA GAAGGAATATTCTTCTGTTACCGGTCCTCTCCTAACAGTTTCAGTCTTTGAACCATACTTGACATCATTGGTGCAAGAGATGTTTCTTGTGGCACAGAAT TCTGATCATCATCAGCTACAACAGTTTGCTTCTTGGGCACTCACCTTCCTTCGGCAACATTTATGGTCCAAGGAACATTTGAGTGTTGATGGTGATAGTA ATGTGGCGGAAACTAATTCAAAATCTGTTTCTCACAGTTTTTCTGAAGAGAATATGGTTGTGAAACTCAGTTTGTGGCTTATGGATATCCAGTACACTGA GCTGGGCTCTACAGCACATGTCAGCACAGTTATTGCTACATTACGGTGCCTTTCTAGAGCTCCCAGGTTGCCAAATTTGGATTGGGGAGCAATTATTAGG CGTTGTATGAGGCATGAGGCTAATTGTGCTGAGTTACCGCCAACATATTCTGCTTTTAAGAAAGGGACCCTCAGGGAGGAATGCATACAGTTCGCATTAG CTCATGCTAGTCAATTTGATTCACTCCTAACTTTTCTTGATGAGCTATCAGACTTTTCCAGGTTCAAGACACTTGAATTAAATCTGCAGTCATGTCTGCT AATTCATCTGGCAGACCTTGCAAAAGTATATTCAAGCTCTAGGCTTGAGAAACTATTTGGAGATGTGACTAATCACTTGTCTTCATTTACTTCCTACGAC GAGTCGAAAAGCTTGTTATGTATCTCATGCTGGAAAGGTCTCTATGAGTGCCTACATGAAGTTTCTGTGGACACTTCTGATCACATATCCCATGTTGAGA GGTGCATGCAGGCTCTATTTACTTTATTACCAGTTACGCAATCTTCTGGCGTTGTAGTGTCAGGGGATGTAAGTTCTGTAGAGGAGTGGTCTGAGGCTCT AAAATGCTTAGGAAAGGCTCGTCAGAGTTGGTTATTGGATTTCCTAAAGGTTTCACATTACGAGTTTGGTCAAAGTGCTGACGATGCTGTTGAAATACAA AAAAAGGTTTGTGCTAAAATCAAGCTGGTGAAGGCTGGTTCTCTTCCTCTAATTGAACTCGGAAAAATGAAATCATACATATTAAACTCCAAATCACAAG GACTTTGGGATGTACTGGTTGAAGTTGTTGCAGCTTTGCATCATGCAGAGGGAAGTGTCAAAAGACAGTGGCTTATGGATGCAGTTGAAATTAGCTGTGT ATCCGCTGTTCCTTCCACGGCACTGCAGTTTCTCGGTCTTCTATCTGCTACCTGCTGCAAATATATGCCTTTTATGATAGTGGACCAACAGACCGTACTG AATGATCTTCCGGTCACTCTTGTGTCTCTTCTAGAAGACAAAAACTGGGATAATGTTGCAGAAACTATTGTTTCCCTTCTCTTTTCATCGACAGAACGGA TATACCACTGGGTTATGCAACTAGCAGATGGTTCTTATGTTCCTGACTCACAGCCCATTGATGAAAGTGAGAATCATATGGCTCCTTTTTT
• Tissue: pods
• Gene name: LI_gene_141598;
• Additional information: details;

Expression of Ll_transcript_393278

FPKM

• PAB: 0
• PNAB: 0.9
• PS1: 1.1
• PS2: 0.5
• PS3: 0.8
• PW1: 0
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_393278

• Blastp: Protein RST1 from Arabidopsis with 47.09% of identity
• Blastx: Protein RST1 from Arabidopsis with 49.5% of identity
• Eggnog: Protein of unknown function (DUF3730)(ENOG410Z8CX)
• Kegg: Link to kegg annotations (AT3G27670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448329.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;