Id Trinity | TRINITY_DN45975_c5_g6_i1 |
---|---|
Name Transcript | Ll_transcript_393059 |
Sequence | CCATGATTGAACAACCATCTTAATAATTAAACACCTGGACACACTTTTTGTCTCTCTGTGAGAGAGTTGAGTAGTGCTTCACCACCTTCTTCCTCTCTCT CTCTCTCTCTCTTCTCTACAAAACTCTCACACTCACTCACCAACCACATTAATCATAATGCCTCATCTGAAACCACTACAAACCCTACTTTCTCTCTCCA CCCTTACCCTCCTCCTCTTATCCTCCCCCGTCGTCGCCGATGACGACTTCGCCGTGATGTCCGCCTTCCTAAAATCCCTGACACCACCACCCTCCGGCTG GTCATCAACCACCCCTTACTGCTCCTGGACAGGCATAAAATGCGACTCTTCAAACCGCGTGTTCACAATAACACTCTCTTCACACTCCCTCACAGGAACA CTCCCTCCCAACCTCAACTCTCTCTCCCAACTCACCTCTCTCTCTCTCCAGAACAATTTCCTCTCCGGACCTCTCCCTTCTCTCTCCAATCTCTCTCTCC TTCAATCCGTTTTCCTTAACCGTAACAATTTTACCTCTTTACCCTCCCCTTCACTTTCTTTTTCCAACCTCCCTTCACTTCAAACCTTGTCCCTCTCAAA TAACCCTAATCTCCCTCCTTGGCCATTCCCATCCGAGTTAACTAACTCACCTAACCTCAACCTCCTTGACCTTGGAACAGTTTCGCTTACTGGTCCGTTA CCGGATCTGTTCGACTCGTTTCCATCCCTACTTAACCTACGACTTTCCTATAATAACCTCACTGGTGTGTTACCAGATTCTCTAGCGAAATCCGGTGTCG CTAACTTGTGGCTCAATAACCAGGAAACCGGTTTGTCCGGTTCAATTGAGGTTCTAGCAAACATGACACTGTTGAAGCAAGTGTGGCTGCATAAAAATCT TTTTACTGGTTCGATTCCGGATTTGTCGAATTGTGGAAACTTGTTTGATCTGCAACTTAGGGATAATCAGTTGACTGGCATTGTTCCGGTTTCGCTGATG AGGCTTTCAAGTTTGTTGAACGTGTCTTTGGATAACAATATGCTGCAGGGTCCTGTGCCGGAGTTTGGTAACGGTGTTATGGTTACTTTGCATGGAGTTA ACAGTTTTTGTAGGGATGTTGTAGGGCCTTGTGATGAGAGGGTGATGGTTTTGCTTGAGATAGCGAAGGGGTTCGGGTATCCGATTAGGTTGGCGAATTC GTGGAAAGGGAATGATCCTTGTGATGGTTGGAGTTTTGTTGTATGTAATGAAGGGAAGATCACTAGTGTGAACTTTGCCAAACAGGGTCTGCAGGGAACC ATTTCGCCTGCCTTTGCGAAATTGACTGATTTGAGGAACTTGTATTTGAGTGAGAACAATTTGACGGGTTTTATACCTCAGAGTTTGACCACTTTGCCCC AACTTGCTACTCTTGATGTATCTAATAATAATCTGTTTGGAGAAGTTCCAAAATTTTCACCAAAAGTGAAGTTGGTAACTGATGGTAATGTTTTGATTGG GAAACTTCCTAGTTCTGGCAGTGGAGGAAGTGGAAATGGAAATGGAAATGGGAGTGGAAGTAGTCCTTCTGTGGGGTCTGCGCCGAGTGGAAGTCCGGCT CAATTGGGAAATGGTAGTTCATTAACAACGGGTTGGATTGCCGGTATTGTGGTTATTGTTTTGTTTTTTGTTGCAGTTGTGTTGTTTGTTAGTTTCAAGT GTTATACCAAAAAGCGGCACCAGAAGTTTGGAAAGGTTGACAATACTGAAAATGGCAGAGGAAATATTAAATTTGATGAAATGAGTGTTTCTAAAGGTTA TAGTGGTATTGCCAGTGAGTTGCAAAGCCAGAGCAGTGGTGATCGAAGCGACCTTAATGTTTTTGAGAGTGGAAGTGCTACGATTTCGATCCAAGTTCTT CGGCAGGTAACAGATAATTTCAGCGAAGATAACATTTTAGGAAGGGGAGGGTTTGGAGTTGTTTATAAAGGTGAGTTGCATGATGGAACTAAAATTGCTG TGAAGAGGATGGAATCTGTTGCAATGGGGAACAAAGGATTGAATGAGTTTCAAGCTGAGATTGCTGTTCTTACTAAAGTTAGGCATAGACATTTGGTTGC TCTTCTAGGATATTGCATCAATGGCAACGAGAGGCTTTTGGTGTTTGAGCACATGCCTCAAGGGACATTAACACAACATCTGTTTGAATGGCGTGAACTA GGGTATGCTCCTCTGACATGGAAACAAAGGGTAGCGATAGCTTTGGATGTAGCACGTGGAGTGGAATACTTGCATAGCTTAGCTCAGCAAAGCTTCATTC ACAGAGACTTAAAACCCTCAAACATACTGTTAGGTGATGACTTAAGAGGAAAGGTTTCAGATTTTGGATTGGTTAAAAATGCCCCAGATGGGAAGTATTC TGTCGAGACAAGGTTGGCAGGAACATTCGGGTATCTTGCACCTGAGTATGCAGGTATAGAAACCCTTTGATTTTAGTCTTGTACCTTGATTTTGTAATTT ATTTTTTTCCTCTTATAGGTTACTACTTTAATGTCATCCTTATTGCTTTGTAGTTGGCAAGGTTAAAGTAGTTTGAAAGAAAAGTAAATAGCAGTTGGGT GGGAAAATAATTAATCATAATCCCCACTCCCTCGATATTTCTGGCTTACCTGTAACTTTCGTCCTCCTTGTAGCTACTTCTTTGCAATTTCCTTTTTTCC TCGTTTCATGAGTTTAATTGAGCTGCATTGTATCTTTCCTATAAATTTCTACTCTGAATACTCATTACATTAAATTCTGGAAAATATTGTCATAGGTTTA GACGGTAGTTCTCTGTTTTTATGAACTAATTTTGTGCATGGTATCCACCCTATTATTTGGTACATTGGCATTAGTATTTGTCATTTTGGAATGTGTAAAG TGTAATGATTCAACTTGCATTATAATTTGTTCGTTGTAAAATACGTGCTCAAATTTTGTTCATCATCTCTTCTTGTCTGATTTAAAGAGTTAAATTAGAG TACTTGTTAGATTATTGTTGCATTCAACGTGATTGGGTGCATATGCTCAAATACTGTCGTACTCCTTTGATTGTAATGAATGTAATGTTGTTTATTGCCA GCGACTGGAAGAGTGACAACCAAAGTGGATGTTTATGCGTTTGGAGTGGTTTTGATGGAACTTGTCACTGGTAGAAAGGCTTTAGATGATAATATGCCTG ATGAAAGGGCTCACTTGGTTTCATGGTTCCGTCGGGTTCTAATCAACAAGGAGAACATCCCAAAGGCAATTGACCAAATTCTCGACCCCGATGAGGAAAC CATGGAGAGCATATATAAATTTGCTGAGCTGGCAGGCCATTGCACTGCTCGCGAACCATACCAAAGGCCAGATATGGGGCATGCTGTGAATGTTTTGGTT CCTCTTGTGGAGCAATGGAAACCTACAACCCATGAAGAAGAAGATGGCTGTGGCATTGACCTTCAGATGAACCTTCCACAAGCTGTACAAAGATGGCAAG CCAATGAAGGCACTTCCACAATATTGAATGACATGTCCTTCTCCCAGACTCAATCAAGTATCCCCTCTAAACCTTCAGGATTCGCCGACTCTTTTGATTC ACTGGATTGCCGGTAATCAGAGTGATAGATTTAAGCACCCTCCCAGTCCCAGGGCTTTTCCATCGATGAGAGTGGAAGATTTGGCTTAGGAAAATAATAT CCAATACAGTATCCTTTACTGAGCTAAACCTAAATATGTAAGTTTGATATTCTTTATTGATTCATTAAAGCTGTCCAATTGCGTTTAAAGCATGGTTGGG GATTTGGGTTACTTGATGAAATGACAAGGGTAATTAGCTTGGGTAAGGCGAAGGAAATATGGAAATGTTAGTTGTCTTATATTCTTTATTTTTGTTTCAT GAAAGAACAATCGGGAAGTGTATGTATTGCTTATAATTGTGTTTTGTGGGTAGACATTAATCACATTTTTTTAATCTTTTGAGGGGCAAAGATCACATGT CCCATTATTACCTCTCGAGCTAATCAGAATATGTGATAATAGGACACTGTTGG BLAST |
Tissue | pods |
Gene name | LI_gene_141642; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_393059
Blastp | Receptor-like kinase TMK4 from Arabidopsis with 57.37% of identity |
---|---|
Blastx | Receptor-like kinase TMK4 from Arabidopsis with 85.38% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT3G23750) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428225.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |