Ll_transcript_393064

• Id Trinity: TRINITY_DN45975_c5_g6_i2
• Name Transcript: Ll_transcript_393064
• Sequence: CCATGATTGAACAACCATCTTAATAATTAAACACCTGGACACACTTTTTGTCTCTCTGTGAGAGAGTTGAGTAGTGCTTCACCACCTTCTTCCTCTCTCT CTCTCTCTCTCTTCTCTACAAAACTCTCACACTCACTCACCAACCACATTAATCATAATGCCTCATCTGAAACCACTACAAACCCTACTTTCTCTCTCCA CCCTTACCCTCCTCCTCTTATCCTCCCCCGTCGTCGCCGATGACGACTTCGCCGTGATGTCCGCCTTCCTAAAATCCCTGACACCACCACCCTCCGGCTG GTCATCAACCACCCCTTACTGCTCCTGGACAGGCATAAAATGCGACTCTTCAAACCGCGTGTTCACAATAACACTCTCTTCACACTCCCTCACAGGAACA CTCCCTCCCAACCTCAACTCTCTCTCCCAACTCACCTCTCTCTCTCTCCAGAACAATTTCCTCTCCGGACCTCTCCCTTCTCTCTCCAATCTCTCTCTCC TTCAATCCGTTTTCCTTAACCGTAACAATTTTACCTCTTTACCCTCCCCTTCACTTTCTTTTTCCAACCTCCCTTCACTTCAAACCTTGTCCCTCTCAAA TAACCCTAATCTCCCTCCTTGGCCATTCCCATCCGAGTTAACTAACTCACCTAACCTCAACCTCCTTGACCTTGGAACAGTTTCGCTTACTGGTCCGTTA CCGGATCTGTTCGACTCGTTTCCATCCCTACTTAACCTACGACTTTCCTATAATAACCTCACTGGTGTGTTACCAGATTCTCTAGCGAAATCCGGTGTCG CTAACTTGTGGCTCAATAACCAGGAAACCGGTTTGTCCGGTTCAATTGAGGTTCTAGCAAACATGACACTGTTGAAGCAAGTGTGGCTGCATAAAAATCT TTTTACTGGTTCGATTCCGGATTTGTCGAATTGTGGAAACTTGTTTGATCTGCAACTTAGGGATAATCAGTTGACTGGCATTGTTCCGGTTTCGCTGATG AGGCTTTCAAGTTTGTTGAACGTGTCTTTGGATAACAATATGCTGCAGGGTCCTGTGCCGGAGTTTGGTAACGGTGTTATGGTTACTTTGCATGGAGTTA ACAGTTTTTGTAGGGATGTTGTAGGGCCTTGTGATGAGAGGGTGATGGTTTTGCTTGAGATAGCGAAGGGGTTCGGGTATCCGATTAGGTTGGCGAATTC GTGGAAAGGGAATGATCCTTGTGATGGTTGGAGTTTTGTTGTATGTAATGAAGGGAAGATCACTAGTGTGAACTTTGCCAAACAGGGTCTGCAGGGAACC ATTTCGCCTGCCTTTGCGAAATTGACTGATTTGAGGAACTTGTATTTGAGTGAGAACAATTTGACGGGTTTTATACCTCAGAGTTTGACCACTTTGCCCC AACTTGCTACTCTTGATGTATCTAATAATAATCTGTTTGGAGAAGTTCCAAAATTTTCACCAAAAGTGAAGTTGGTAACTGATGGTAATGTTTTGATTGG GAAACTTCCTAGTTCTGGCAGTGGAGGAAGTGGAAATGGAAATGGAAATGGGAGTGGAAGTAGTCCTTCTGTGGGGTCTGCGCCGAGTGGAAGTCCGGCT CAATTGGGAAATGGTAGTTCATTAACAACGGGTTGGATTGCCGGTATTGTGGTTATTGTTTTGTTTTTTGTTGCAGTTGTGTTGTTTGTTAGTTTCAAGT GTTATACCAAAAAGCGGCACCAGAAGTTTGGAAAGGTTGACAATACTGAAAATGGCAGAGGAAATATTAAATTTGATGAAATGAGTGTTTCTAAAGGTTA TAGTGGTATTGCCAGTGAGTTGCAAAGCCAGAGCAGTGGTGATCGAAGCGACCTTAATGTTTTTGAGAGTGGAAGTGCTACGATTTCGATCCAAGTTCTT CGGCAGGTAACAGATAATTTCAGCGAAGATAACATTTTAGGAAGGGGAGGGTTTGGAGTTGTTTATAAAGGTGAGTTGCATGATGGAACTAAAATTGCTG TGAAGAGGATGGAATCTGTTGCAATGGGGAACAAAGGATTGAATGAGTTTCAAGCTGAGATTGCTGTTCTTACTAAAGTTAGGCATAGACATTTGGTTGC TCTTCTAGGATATTGCATCAATGGCAACGAGAGGCTTTTGGTGTTTGAGCACATGCCTCAAGGGACATTAACACAACATCTGTTTGAATGGCGTGAACTA GGGTATGCTCCTCTGACATGGAAACAAAGGGTAGCGATAGCTTTGGATGTAGCACGTGGAGTGGAATACTTGCATAGCTTAGCTCAGCAAAGCTTCATTC ACAGAGACTTAAAACCCTCAAACATACTGTTAGGTGATGACTTAAGAGGAAAGGTTTCAGATTTTGGATTGGTTAAAAATGCCCCAGATGGGAAGTATTC TGTCGAGACAAGGTTGGCAGGAACATTCGGGTATCTTGCACCTGAGTATGCAGCGACTGGAAGAGTGACAACCAAAGTGGATGTTTATGCGTTTGGAGTG GTTTTGATGGAACTTGTCACTGGTAGAAAGGCTTTAGATGATAATATGCCTGATGAAAGGGCTCACTTGGTTTCATGGTTCCGTCGGGTTCTAATCAACA AGGAGAACATCCCAAAGGCAATTGACCAAATTCTCGACCCCGATGAGGAAACCATGGAGAGCATATATAAATTTGCTGAGCTGGCAGGCCATTGCACTGC TCGCGAACCATACCAAAGGCCAGATATGGGGCATGCTGTGAATGTTTTGGTTCCTCTTGTGGAGCAATGGAAACCTACAACCCATGAAGAAGAAGATGGC TGTGGCATTGACCTTCAGATGAACCTTCCACAAGCTGTACAAAGATGGCAAGCCAATGAAGGCACTTCCACAATATTGAATGACATGTCCTTCTCCCAGA CTCAATCAAGTATCCCCTCTAAACCTTCAGGATTCGCCGACTCTTTTGATTCACTGGATTGCCGGTAATCAGAGTGATAGATTTAAGCACCCTCCCAGTC CCAGGGCTTTTCCATCGATGAGAGTGGAAGATTTGGCTTAGGAAAATAATATCCAATACAGTATCCTTTACTGAGCTAAACCTAAATATGTAAGTTTGAT ATTCTTTATTGATTCATTAAAGCTGTCCAATTGCGTTTAAAGCATGGTTGGGGATTTGGGTTACTTGATGAAATGACAAGGGTAATTAGCTTGGGTAAGG CGAAGGAAATATGGAAATGTTAGTTGTCTTATATTCTTTATTTTTGTTTCATGAAAGAACAATCGGGAAGTGTATGTATTGCTTATAATTGTGTTTTGTG GGTAGACATTAATCACATTTTTTTAATCTTTTGAGGGGCAAAGATCACATGTCCCATTATTACCTCTCGAGCTAATCAGAATATGTGATAATAGGACACT GTTGG
• Tissue: pods
• Gene name: LI_gene_141642;
• Additional information: details;

Expression of Ll_transcript_393064

FPKM

• PAB: 2.9
• PNAB: 18
• PS1: 17.4
• PS2: 10.3
• PS3: 10.7
• PW1: 10.9
• PW2: 11.5
• PW3: 8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_393064

• Blastp: Receptor-like kinase TMK4 from Arabidopsis with 61.02% of identity
• Blastx: Receptor protein kinase TMK1 from Arabidopsis with 55.16% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT3G23750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428225.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;