| Id Trinity | TRINITY_DN45980_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_393452 |
| Sequence | AAGTCATCGGTGTTATATGAAAAAGTGAGTGGTCTCTATTCTCTTTCGTGGAACAAGGTACCAATTTCAGATCTCACTAATTTTCTGGCTTTCCATTTCC ATCAACATTGTCATTAACTCAATTCCATTTCTGGGTTTTAATTATCTATAATGTACACTTTCATCTTTTCATTTCCTATACTACATTTTAAGTTATGTGA GTTTTTAATGTATACTTATTTGGATTCATATTTTTATTTTGATTAAAAATACTTAGTGGGATTTAATTTGTCGGATAAAATTACATATATCTACCTTTCA TAGTATTAAACTAGTGGGGAAGTGAGAATCTCGTATATTGTGCCGCCCTTATTTAATTTGGACTAGTGGGGTTGTGGATTATTATTCTATTGGCATTGCA GGACTACTGTTGTAGCATCTTGTTATTTCTGTTTGCACTTTTTGTCGGTATAATTAAGGCTATCCTTTCAACTTATTGTTAATGAATTAATCTCTTTCGT GATGTGGACCTCTTAATAAGTGTTGTTCTTAAAAATCGAACCTTTAACTTTTGGTATTTCTGGAGATCTAGTCGCGTTTTATACCATTTGACGAACACCT TGTTAGTTGTGTTTTTATGCTTAAATTACATAAAGTTGGCTTCTTTAGCTTAAGTTTGTTGATGGGGGTCACTTGTTATGAGATTTACATCTGTTTTTTT TTACTGTCCTATTTCATTGTGTGCCATTGTGATCAAAGCAAGATGAGTAAATGGCGATTTTGGTTTCGCTTGATTAGTTTGTTGGGTAGAAGAAATGGGA CTGAATGCCTTTTCATCTCACCTTGTGTTGTAGAAGATCCCATTTAAACATTAGATTTACTAGATGAAAAGATAAAAAGGAAATGTATGTTTATGTGTTA AAACAAAATATTCATGTAATTTGGAGTTTAATTCAGTTTTTCTCCTCAAAATGCTCATTCATACAAGTTTCCCCTTTGTTTTGTTCTTCTTTGTGAGGTT AGTGACAACCATTTTCAATTATTCTGATTACCTCTATAGACAAATCCAAATTTGCCAATCCTCCTCAATATTTGTATCACCGGTTGGTTTTCGTCTTTAT AGCTACACTTTTCGTTCTACAGTCTACACTAATAATATACCTATGCATGCTATTCACTACGACTTTCGTGGTTGAAGAATCATATAGTTATGTGGAGAAA GGAAGAGGTTGTATTGTTGTATATAATTGAAAGCTAATAGCTGCTCTTACTTCATGTAAAATAATCACCTGTAAGCATTTAAAAGGTAATTAACTTGTTT ACTTTAGGCTTCAAAGTAAATACTTCAATGGTTGTAGTATCTTAACCATTCATAGTTGTTGGCTTCTATTGAGCTTTGATGACTCTTGGTTCTGTCTGGT GCAATTACGGTTATCTTTTCATTTCATGAAAGAAAATATGCAATGCTTCAATGCAGGTTTACCTACGAAAGTTCTAGTTTAACAGGAAATGGGTCGTGGG GTCAGTAGCGGTGGTGGTCAGAGCTCATTGGGCTATCTCTTTGGCAGCGGGGAGGCTCCAAACAATGCTCAAGGTTCCAACAATCAAGGTCAGCCCGAAA ATGGTGTCCATGCTCAAAATCCTAGTGGTGCGTCACAGCCAATTTCGACCAACCAAGGTCAGACTGCAAATGGTAGCCATGCTCAAAACGCTAGTGGTTC TTCACCAATTGATAAGGGAATTCCGGCTGGAATTCCTGGGAATCTAAAAAACAATTACCATCGTGCCGATGGACAAAACTGTGGCAACTTTATCACGGAT CGGCCATCTACCAAGGTCCATGCTGCTCCGGGTGGTGGATCTTCTTTGGGTTACCTCTTTGGTGATTCCAGGAAGTAGTAATTCCTCAGTGTGAAGTGTA TTCTACACTCTAACGTACAATATGCAAAATAGATGGTCCAAAACTATGCTGATTCACAATTATGTGTATTTCTGTTAATGAAATTTACTGTGCTGGTGTT GAAGTTGTAGCTCATAATTGTTCTGTTGTTTTTATTTGCTTATGTTCATACCATAGTACTGATTTTATTGCAATGTCTTCTGCCGCATATTTTATAATTG TTTGTTTTCCGAAAAATTATCGAACTCTCTAGAACCTCGACCTTTTTCTATAAATGGATCTCACAACATATCTCACATTTATAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_141666; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_393452
| Blastp | Protein SPIRAL1-like 1 from Arabidopsis with 60% of identity |
|---|---|
| Blastx | Protein SPIRAL1-like 2 from Oryza sativa with 82% of identity |
| Eggnog | in maintaining the cortical microtubules organization essential for anisotropic cell growth(ENOG410XU77) |
| Kegg | Link to kegg annotations (AT1G26355) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442747.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |