| Id Trinity | TRINITY_DN46001_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_418547 |
| Sequence | GATGACGATAAGCTTGCTGATTCTCATCCCCCAAGGCTGTTGTGTGTTGAAAAGGGGAAGGCAGAACCCATTGAGACTGATACTTTGACAAGGGAATTAC TGGACACAGATAAATGCTATATTATAGATTGTGGGTTGGAAGTGTTTGCATGGATGGGCAGAAAATCTTCTCTAGATGAAAGAAAAAGTGCAAGTGGCGC TGCAGATGAGTTAGTAGGTGGCACTGGTCGCTCAAAGTCCTACATAATTCGTTTGATTGAAGGATTTGAAACTGTGATGTTCAAGTCCAAGTTTGATTCT TGGCCTCAGACAACTAATGTAGCGCAGGCTGAAGATGGCCGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGATTGGATGTCAAGGGTCTCTTGAAAA CGGATCCTGTAAAAGAAGAACCTCAAGCCTACATAGATTGCACAGGGTATTTGCAGGTTTGGCGTGTGAGCGGTCAGGAAAAGGTTCTTCTTCCAGCCTC TGGCCAGTCAAAGTTTTATAGTGGAGATTGCTACATCTTTCAGTATTCATATCCTGGAGATGATAAGGAAGAGCATCTTATCGGAACATGGATTGGAAAC AATAGTGTTGAGGAGGATAGAGCATCAGCTCTTTCAATGGCTGGCAAAATGGTAGAATCAATGAAGTTTATTCCCTCCCTGGCTCGTATTTATGAAGGCA GCGAACCAATTCAATTTCATTCTATTCTCCAAACCTTCATTGTTTATAAGGGTGGACTTAGTGATGGATACAAGAATTACATTGCGGAAAAGGATATACC AGATGAGACATACAGTGGGGAGGGCGTTGCATTATTCCGCATCCAGGGCTTTGGACCTGAAAATATGCAAGCTGTACAAACTGACCCAGTTGCTTCCTCC TTGAATTCTGCTTACTGCTACATACTACATGATGGGCCTACTGTCTTTTCATGGTCAGGAAGTTTTACAACTGCAGATGACCAGGAACTTGTTGAGAGAA TGCTGGATTTGATAAAGCCGGATTTACAATGCAAACTACAAAAGGAAAATGCAGAATCTGAAAAGTTTTGGGAGATATTAGGAGGAAAAACAGAATATCC CACTCAAAAGATTGTGAGAGATGCTGAAAATGATCCTCACCTTTTTTCTTGCAACTTCTCAAAAGGAGAACTAAAGGTGAAAGAGATATACAACTTCTCT CAGGATGATTTGATGACGGAAGATATTTTCATCTTGGATATTCACTCGGCAATCTTTGTATGGGTTGGCCAGAAGTTTGACCCCAAGAGTAGATTGCAGG CTTTAACAATTGGTGAGAAATTTCTCGAGCACGATTTTCTTCTAGAAAAAGTATCTCGTGTAGCTCCAATATATGTTGTCATGGAAGGCAGTGAGCCACC TTTCTTCACTCACTTCTTTAAATGGGAGTCTGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTTACAATAGTGAAAAGTGGTGGTACTCTA CCTTTGGATAAACCCAAACGAAGAGCATCTGTAGCATATGGGGGAAGGTCTAATAGTCTTCCAGAAAAATCCCAGCGTTCGCGCAGCATGTCTGTCAGTC CGGATCGTGTTCGTGTGAGGGGAAGATCTCCAGCCTTTACTGCACTAACAGCTAATTTTGAGAGTCCTAAAGATAGGAACCTTTCAACTCCACCTCCAAT GGTTGCAAAACTGTATCCAAAATCTAGGTCACCAGATTCAGTTAAACCGGCTCCTAAAGCTGCAGCCATAGCTCAGCTTACTTCTACTTTTGAACAACCA CCATCAGCGCGAGATAGTTTGATACCTCGGTCATTGAGAGCGAGTTCAGATGCCTCAAAATCAAGCACCAATAAAAATGAGCAGGAAGAAGAGTCCTTGA ACAGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_141729; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418547
| Blastp | Villin-4 from Arabidopsis with 66.88% of identity |
|---|---|
| Blastx | Villin-4 from Arabidopsis with 67.1% of identity |
| Eggnog | capping protein (actin filament) gelsolin-like(ENOG410XR0A) |
| Kegg | Link to kegg annotations (AT4G30160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462577.1) |
| Pfam | Gelsolin repeat (PF00626.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |