Id Trinity | TRINITY_DN46001_c0_g1_i6 |
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Name Transcript | Ll_transcript_418548 |
Sequence | TGTTTTGAAGACTTCATTGTTAATCTGCTTAATGCTTGGTTAATCGTGCTGTCTTTTAGTTCTTAATATGGATTTAACCATGACAACTCTTTAACATTAG AACACAAGGTTTTTACTTTTTAGTTAACCATTTTCAGCACCTTTTACATCTGTTAGTATTTCTGAAGCCAGGTGTACAATTCTTAACTTATTTTTTTAAG TGAACAGAAATTTCTTGAGCATGATTTTCTTCAAGAAAAAGTATCTTCTGTAGCTCCAATATATGTTGTCATGGAAGACAGTGAACCACCTTTCTTCACC CGCTTCTTTAAATGGGAGCCAGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTTACAATTGTAAAAAATGGTGGTACTACACCTTTGGAGA AACCGAAACGAAGAGCATCTGTATCTTCTGGGGGAAGATCTGGTAGTCTTCCAGAAAAATCTCAGCGTTCGCGCAGCGTGTCTGTTAATCCTGATCGTGC TCGTGTTAGGGGAAGATCTCCAGCCTTTACTGCACTAACAGCTAATTTTGAGAGTCCTAAAGATAGGAACCTTTCAACTCCACCTCCAATGGTTGCAAAA CTGTATCCAAAATCTAGGTCACCAGATTCAGTTAAACCGGCTCCTAAAGCTGCAGCCATAGCTCAGCTTACTTCTACTTTTGAACAACCACCATCAGCGC GAGATAGTTTGATACCTCGGTCATTGAGAGCGAGTTCAGATGCCTCAAAATCAAGCACCAATAAAAATGAGCAGGAAGAAGAGTCCTTGAACAGCA BLAST |
Tissue | pods |
Gene name | LI_gene_141729; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418548
Blastp | Villin-4 from Arabidopsis with 62.89% of identity |
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Blastx | Villin-5 from Oryza sativa with 60.12% of identity |
Eggnog | capping protein (actin filament) gelsolin-like(ENOG410XR0A) |
Kegg | Link to kegg annotations (AT4G30160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442412.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |