Ll_transcript_418907

• Id Trinity: TRINITY_DN46030_c3_g2_i2
• Name Transcript: Ll_transcript_418907
• Sequence: TGACAAGTAATGGCATATGAATGGATACATTTTGTGCTAATGTGCACCCCATTTTAACTTTGAAGATTTGGAGTGTGGGCCTTCATCCCAAGTATTATTT TGATGAAATTTCTGGTTCGGCCTCTTCTACTTCACATTTACAATTCCACCAAGAGAGGATGACTCTGTAAACTAAAGCATCATTTAAGTGTCACCTTTTC AGTTTCCAAGCTACAACAATGACTATGGAGACTTAATATAACACTGGTAACATTCTTAGCAAAAAATGATCATGTTTCGATCAAGATGCAAACTTTTCAA TATCTCTCGTTTTTATGTTTCTTCATTCTACTCCACCCAAACCATGGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCCCCTCTGTGCTTCAAAAA CGGATTTTGATGAGTGGGGACCCCAGAACTTCAATGGTTCCTATTTTGAACCAATGGGTTGAAGAAGAAAAAGGTAGAGATATCACTCAATCACAACTTC AACATTTAATTAAGCGCCTTAGTCATTTTCGTCGCTTCAATCATGCCCTTCAGGTATCAGAATGGATGACCAATGAAAGAAAGTATGACTTATCACCGGG TGACATTGCTAAACAGCTCAACCTGATTTCAAAAGTTCATGGCCTAGAACAAGCAAAAAAGTTTTTCCAGGGCATCCCTGATGCTAAAATTGGATTCAAG GTCTGTGCTGCTTTGTTGAGCTGCTATGCAGAACATAAATCTTTGGATGAAGCAGAGGCTATCATGAAGAAAGTTAAGGAGTACCATCCAGTGCACATAA CAGTGTGTTACAATATGATGTTAAAACTCTATGCTCAGGTGGGTAAATATGAGAAATTGGAGAGGCTGATGCAAGAAATGAAAGACAAGGACATCTGCAA CGGTGCTTCGTTTACTATTCGGTTGAATGCATATGTTGCCGCTGCAGACATAGAGGGGATGGAGAAGTTGCTGATGTGGATGGAAGCTGATCCCATAGCA ACTGTGGACTGGTATACATACACTACTGCCGCAAATGCTTATATCAAAGCTGGAGATTTTGAGAAGGCCACTGCAATGTTAAAGAAATCGGAGCAATTAG CTAGAGGCAAGACAAGAAGGCTTGCCTATGAATCCCTTCAAACTATGTATGCTGCTATTGGGAATAAGGATGAAGTTTATCGAATTTGGAATAGGTGCAA AATTTTTAAGAGCTCCTATAATTCAAGTTCCATTAGCATGTTAAGCTCATTAGTGAAGTTGGATGACATTGATGGAGCCGAGAATCTTGTGGAGGAATGG GAATCCAAATGTACACATTTTGATACTAGAATTCCAAATCTGATGATCACTGCTTACTGTAAATGGGGTCTATTGGATAAGGCTGAGGCTTATATCAAGA GACTTTTGGATAGTGGCAAGAAATTAGATGGAAGTACATGGGATCGTTTCGCATTCACTTATCGCATGGGTAACGATATGGACAAAGCAGTTAAGTCAAT GAAGAAAGCAATCTCGGAAGATCGACCAGGATGGAAACCTAACCCCTTTACGTTGGTTGCATGCATCAAGTACGCAAAAGAAAAAGAAGAATTAGACTTA GCCCTTGAGCTTCTAAGTTTATGTAGAAAACATGGTCATATATCTGTCGCTACCTATGATGGACTAGCAAGTTATGTTCATAGTGAAATCCTGGATACAA AAGCCTTTGATCTGATTAAAGGAGATTATCAGTTGGATGAAAAAATTCAACTTCTTGAGGGATAGAACTAATGGTTGAATCTAAAAGATGGTGGACAGGA CTGAATTACATGTAAAAGATGTAGCAAATTGTTTCCATGAAAGAGTAAATTTTCTAGCCATAGCTTATTGCCCTGATAACTTCTCCTACTTCCTATGTTT TATGTTTTAGACACTAAGTTGCAACTTTCATCATTATGTCCCAGAGTGTCCTAATTTACTCAATGTCATTTATAACTATTCAAACAACTTTACTGAATTT AGATTATTATCCTGTTGAAAAAAAAGCTTCAATTATGTTTGATTGGAGATTATATTTGTTAACTTGTAGTCATTGTTACAAAA
• Tissue: pods
• Gene name: LI_gene_141857;
• Additional information: details;

Expression of Ll_transcript_418907

FPKM

• PAB: 0.3
• PNAB: 1.2
• PS1: 3.3
• PS2: 1.4
• PS3: 3.7
• PW1: 0.7
• PW2: 1.1
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_418907

• Blastp: Pentatricopeptide repeat-containing protein At2g20710, mitochondrial from Arabidopsis with 40.72% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g20710, mitochondrial from Arabidopsis with 41.58% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G20710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429637.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;