| Id Trinity | TRINITY_DN46035_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_418084 |
| Sequence | CCTCATTCCACAATCTATATATATATATATATATACTGATTTAAATAATAAGAATACAAATTAAAAAAAAGTATATATTAAGGTGCATGTTTCTGGATTG TTCATGAAGCCTGCTAAGGACAGGGATATTTTCTTTGCTCTTCACCTTTACTCCACGGAATCAAAGGCAGAGAATACTAAATTATGTAGTGTAAACACAA CTTGATATCCAAGTTGTGTAATATAATAATACATCACAATATATATATATATTTGATGGTATATATGTGATTATATATCATGCATTTTATATATATATGT TATGGTTATACAAAGTTTGAGTTGTTTCAATTCGTCGACAAGAAAACTTAGTTTGACAATTTGATTGGTTTTTTGGATATTTTTCCTCTGCTGCGGTTTT TCATAGCTTCTGGTTTGAAGGTTTGTATTTTTATTGTTGTTGGGAAAAATGGCTAATGAAGGAGATAAAGGCAATGATTTCTATGGTGTTCTGGGATTGA ATAAGGAGTGCACTGAATCAGAGCTCAGAATTGCTTATAAGAAACTTGCACTGGTTAGAATTCAATGCTTATTTCTGCAAGTTTAATCTTTTTTTCTCTT TTTTACAATCATGTCTTAAAACCAACAAAAAAAATCACTTGGGTCTTCTCAAAATCACTTTTTTCATGGTTGAGAGTTGAATATAGAAATGGCACCCAGA TCGTTGTTCAGCTTCTGGGAATTCTAAGTTTGTTGAAGAAGCTAAGAAGAAATTCCAGGCAATCCAACAAGCCTATTCTGTTTTATCTGACGCAAACAAG AGGTTAATGTACGACGTAGGAGTCTATGACAGTGATGATGACGAAAATGTAAGTCTAGTTAACAACTTCACATGCCCTTATGCTTATCCTAAGTTTTATC CCTTCCCTTTCTCAATATCAGCACTACTAGTTATCCGTCGAGTGCTTCAAAAAACAAAAGAAATTTATCCCTTTAATTACAATAAAGTTATAATTTTGTC ATTAAAAACAAGTGTAAAAACATGTATTTATCTCTATATCGGACAGGATCCTTATTCTACTAGTTTGACCTTGTTTTTCATTGTAACCAAGTTGGATTCA TGGGTTGATTGGTCTTTTTCCAAAAAATTCTGCTTTATTGGTGTTGTCCACGGATAGGGATCACCAATCACATATTTCCTACGTGAATAAAAGAAAAAAT TTAAAAACAAAAATTTCAATTGGTTAGGGACATGAAATGTGATAGGTTCCGGACAAGTGATCTTTGTCGATTGTCCACTTGTCATGTCAACATGTCATCT ACAGTATGGTCCATTTTTATTTCTTTCTACTTACCAGAAAAGAGAGGGATATGTTTGGGATTAATAAGAATCTGTTTTGTCTTACAAAAATGCTTGATTC TATATTATTTGGTTCAAAGAACAAGCTTTTTAAGTCAAGCCAAGTCAATTGGTGTGTTACACAGCACATGGACATGTAACATGTTGCTTATAAAGTTCAG TTAGAGGAATAATTCATTGAATCGGGTCAATTGGTTGTACTAATAGTAAATTTTAATTTCCTTGTGCAGGGTATGGGGGATTTCTTGAACGAAATGGTAA CAATGATGAGCCAAACAAAACCAAATGTGAGCCCCTTTTATTCATTGCATGTGTTTAGTGGAATGTTGGGGTGATAAAGGTGTAGATACAATGCTTTCTA GTTTCTATTATATTTTATTTGATTATGGATAAAGCATTAAAATCTGGACATAAACAATTAAACATGTAGTGTCTGCTTTTGTGAAATACTATGTTGTTAG CTTCTATGTTGTTTCCAATGGGTCACGGGTTTACTTTTCTTTGTTTTTGGCCCAGAATCATGTAGTAGTTGGAAATACTCAAAGCATTTTATTATTTTAT TAATATTTTTTTGTCACTTATACAAAAAAACATTTATATAGGTTAATTGTTGAATGAAGTGCATGAAGGATGATATACTAAGCATTGCCAAGAATTTATA GTTTAAGGATGATTGCTATTAGTAACAGATATTAAACTTTGTGTCTAAATTAGAATGAAGAAATTTTGTATAACAATTTATATATGTATGTAAAATAACA GGAAAGTGGAGGGGAGAGCTTTGAGGAGTTGCAACAATTGTTTGAAGATATGTTTCAAGATGATATTAGATCAGATAGAAGAACCTCTCACACTACTGCT ACTTGTTGTACTTCATCTACATGCATGACTTTTAGTGAAACTTCTAGTTCAAATAAACGCAATTCCTCCGAGATGAATTTTGGGAGGGTGGATGATTCTT TTGATTTCAATGGTGGCTACCCGAACTTCTGTTTTGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_141898; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418084
| Blastp | - |
|---|---|
| Blastx | Chaperone protein DnaJ from Thermosipho with 55.81% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (THA_304) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431709.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |