Ll_transcript_418085

• Id Trinity: TRINITY_DN46035_c0_g1_i3
• Name Transcript: Ll_transcript_418085
• Sequence: CCTCATTCCACAATCTATATATATATATATATATACTGATTTAAATAATAAGAATACAAATTAAAAAAAAGTATATATTAAGGTGCATGTTTCTGGATTG TTCATGAAGCCTGCTAAGGACAGGGATATTTTCTTTGCTCTTCACCTTTACTCCACGGAATCAAAGGCAGAGAATACTAAATTATGTAGTGTAAACACAA CTTGATATCCAAGTTGTGTAATATAATAATACATCACAATATATATATATATTTGATGGTATATATGTGATTATATATCATGCATTTTATATATATATGT TATGGTTATACAAAGTTTGAGTTGTTTCAATTCGTCGACAAGAAAACTTAGTTTGACAATTTGATTGGTTTTTTGGATATTTTTCCTCTGCTGCGGTTTT TCATAGCTTCTGGTTTGAAGGTTTGTATTTTTATTGTTGTTGGGAAAAATGGCTAATGAAGGAGATAAAGGCAATGATTTCTATGGTGTTCTGGGATTGA ATAAGGAGTGCACTGAATCAGAGCTCAGAATTGCTTATAAGAAACTTGCACTGAAATGGCACCCAGATCGTTGTTCAGCTTCTGGGAATTCTAAGTTTGT TGAAGAAGCTAAGAAGAAATTCCAGGCAATCCAACAAGCCTATTCTGTTTTATCTGACGCAAACAAGAGGTTAATGTACGACGTAGGAGTCTATGACAGT GATGATGACGAAAATGTAAGTCTAGTTAACAACTTCACATGCCCTTATGCTTATCCTAAGTTTTATCCCTTCCCTTTCTCAATATCAGCACTACTAGTTA TCCGTCGAGTGCTTCAAAAAACAAAAGAAATTTATCCCTTTAATTACAATAAAGTTATAATTTTGTCATTAAAAACAAGTGTAAAAACATGTATTTATCT CTATATCGGACAGGATCCTTATTCTACTAGTTTGACCTTGTTTTTCATTGTAACCAAGTTGGATTCATGGGTTGATTGGTCTTTTTCCAAAAAATTCTGC TTTATTGGTGTTGTCCACGGATAGGGATCACCAATCACATATTTCCTACGTGAATAAAAGAAAAAATTTAAAAACAAAAATTTCAATTGGTTAGGGACAT GAAATGTGATAGGTTCCGGACAAGTGATCTTTGTCGATTGTCCACTTGTCATGTCAACATGTCATCTACAGTATGGTCCATTTTTATTTCTTTCTACTTA CCAGAAAAGAGAGGGATATGTTTGGGATTAATAAGAATCTGTTTTGTCTTACAAAAATGCTTGATTCTATATTATTTGGTTCAAAGAACAAGCTTTTTAA GTCAAGCCAAGTCAATTGGTGTGTTACACAGCACATGGACATGTAACATGTTGCTTATAAAGTTCAGTTAGAGGAATAATTCATTGAATCGGGTCAATTG GTTGTACTAATAGTAAATTTTAATTTCCTTGTGCAGGGTATGGGGGATTTCTTGAACGAAATGGTAACAATGATGAGCCAAACAAAACCAAATGTGAGCC CCTTTTATTCATTGCATGTGTTTAGTGGAATGTTGGGGTGATAAAGGTGTAGATACAATGCTTTCTAGTTTCTATTATATTTTATTTGATTATGGATAAA GCATTAAAATCTGGACATAAACAATTAAACATGTAGTGTCTGCTTTTGTGAAATACTATGTTGTTAGCTTCTATGTTGTTTCCAATGGGTCACGGGTTTA CTTTTCTTTGTTTTTGGCCCAGAATCATGTAGTAGTTGGAAATACTCAAAGCATTTTATTATTTTATTAATATTTTTTTGTCACTTATACAAAAAAACAT TTATATAGGTTAATTGTTGAATGAAGTGCATGAAGGATGATATACTAAGCATTGCCAAGAATTTATAGTTTAAGGATGATTGCTATTAGTAACAGATATT AAACTTTGTGTCTAAATTAGAATGAAGAAATTTTGTATAACAATTTATATATGTATGTAAAATAACAGGAAAGTGGAGGGGAGAGCTTTGAGGAGTTGCA ACAATTGTTTGAAGATATGTTTCAAGATGATATTAGATCAGATAGAAGAACCTCTCACACTACTGCTACTTGTTGTACTTCATCTACATGCATGACTTTT AGTGAAACTTCTAGTTCAAATAAACGCAATTCCTCCGAGATGAATTTTGGGAGGGTGGATGATTCTTTTGATTTCAATGGTGGCTACCCGAACTTCTGTT TTGGG
• Tissue: pods
• Gene name: LI_gene_141898;
• Additional information: details;

Expression of Ll_transcript_418085

FPKM

• PAB: 1.1
• PNAB: 0
• PS1: 0
• PS2: 0.2
• PS3: 0.2
• PW1: 0.2
• PW2: 0.5
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_418085

• Blastp: Chaperone protein DnaJ from Beijerinckia with 50.72% of identity
• Blastx: Chaperone protein DnaJ from Beijerinckia with 50.72% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (Bind_0129)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455560.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;