Id Trinity | TRINITY_DN46035_c0_g1_i7 |
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Name Transcript | Ll_transcript_418089 |
Sequence | CCTCATTCCACAATCTATATATATATATATATATACTGATTTAAATAATAAGAATACAAATTAAAAAAAAGTATATATTAAGGTGCATGTTTCTGGATTG TTCATGAAGCCTGCTAAGGACAGGGATATTTTCTTTGCTCTTCACCTTTACTCCACGGAATCAAAGGCAGAGAATACTAAATTATGTAGTGTAAACACAA CTTGATATCCAAGTTGTGTAATATAATAATACATCACAATATATATATATATTTGATGGTATATATGTGATTATATATCATGCATTTTATATATATATGT TATGGTTATACAAAGTTTGAGTTGTTTCAATTCGTCGACAAGAAAACTTAGTTTGACAATTTGATTGGTTTTTTGGATATTTTTCCTCTGCTGCGGTTTT TCATAGCTTCTGGTTTGAAGGTTTGTATTTTTATTGTTGTTGGGAAAAATGGCTAATGAAGGAGATAAAGGCAATGATTTCTATGGTGTTCTGGGATTGA ATAAGGAGTGCACTGAATCAGAGCTCAGAATTGCTTATAAGAAACTTGCACTGAAATGGCACCCAGATCGTTGTTCAGCTTCTGGGAATTCTAAGTTTGT TGAAGAAGCTAAGAAGAAATTCCAGGCAATCCAACAAGCCTATTCTGTTTTATCTGACGCAAACAAGAGGTTAATGTACGACGTAGGAGTCTATGACAGT GATGATGACGAAAATGGTATGGGGGATTTCTTGAACGAAATGGTAACAATGATGAGCCAAACAAAACCAAATGAAAGTGGAGGGGAGAGCTTTGAGGAGT TGCAACAATTGTTTGAAGATATGTTTCAAGATGATATTAGATCAGATAGAAGAACCTCTCACACTACTGCTACTTGTTGTACTTCATCTACATGCATGAC TTTTAGTGAAACTTCTAGTTCAAATAAACGCAATTCCTCCGAGATGAATTTTGGGAGGGTGGATGATTCTTTTGATTTCAATGGTGGCTACCCGAACTTC TGTTTTGGGACAGGTGAATCACATTCAAGATTTCAAGAAGCAAAAGGGAGGAATCCAAGAAGAAGGAGGTAAGAGTAGACATAGAAGTGGTAGAAAGCAA AAAATCTCACATGGTCATGATGTTTCTTCTGATGACTTCCCTAGCATTTCTGCTATGTAATGAACTTGGTGGCATATTAGTTTGCATTTGGATATGTGAA ATCCTTCATCTTTGACATGTTACAAAAGTATTAAGTACTCACTTCTAAGTCATTAAAAGTGGCACTGTGGCATTTTCAATCTTTTGTAACCATGGTACAA TCATGGCTAAGACTTTGAACTTAAATCAATTGATAACCCATCTTAGTCTCTTCAATTATGCAGATTGCAGAGAATAATATTCTTGGTTTGCCTAAATTTG ACAACAGAAAGAAAACATTATGTCATTTTTGAAGTTGGTCAATTCAGCATCTCATATGTTATAAGATATGTGATTTGCTTAGTCACAAATCTCACATTCC TTGAGATATTTTCTATGCATAATGAAAACAAAGTGGAACTATTAGAGGTTATAGTTGTATGACAATGACTAATGAATCAAGCAAAATACAAATGGAAGGT GGTGGTTACTAATTTTATAAATGGAAGGGTCCTACATCACATGGGATATGGGACCCGGATAAGTACTGTTGTATGATCCACTTGCAAAAGCCTATGCCTA CATTTTTGGTATGGAAAGTTGAGCATAGTACAATAAACTAGTCAACTTAAAATAATGCAGATAGTTCAAATACACACTTCTAGTCTACTTTTGGTTTTGA AAGCCATTTGGGACCAAACAAGTAGCCAAATATGTCCAATGCTGGTGTTATGATTTATGGGTCCCATACACCCAATAATTGGTTGGCTATTGTTGTGAAA GTTGTAAGTGTGACTTGTGCTTAAAGTAAAAATCCATGTTAGAGATCAATACATCTAATATCTTATGATGATAGATTTGCTTTGTGTTGTTATTCTTTAT TTTTTGACTGATTTATTTGCATATATTCTTGGATATTAAGGTTCCACACACCTCTAGCAACATGTTTTAGAAAATATGGGCTCATTCTCTTATTATTAGA TTGGGCCTGTATTATTGTACTTGGTATTTAAAGTTGAACGATTAATATCCATTGTGCTAATTGAATGTTTTATTTTTCTTATTTAAACTAGATTATATTC ATTTTGGTAAAACTTATATTTTAACAATTTTATAATATGCTTATCAAACTAATAAATCAGTTTTACAGAAAAAATATAAACATTGATAGTATATGAGTTT TATATGTCATCATTATATCATTTAATGTTCATGTTTTATTACCGACTCATCAAAAAATTAATCCAATATAAATATCCTATAACTAGGGCTTAGCTTGAAT CCAGTGAGGATTGGATGGGTAGTGATTGTTTAGACCCATACAAAGGGTGAAGTGTTTTGTGGGATCTTTCTATGATGTAGGTACATTTTCGAGTAAAGTT TAAAGTAGCTGATTCTCAAGCAACCAAAAATCAAGAGGGGAAACAAACAGAAATTAAAGATCCATCATTTTATTGATTTATTTTATATATACACACTCTA TGTTATGATGAGATTATGATGTTCAATTATAATGACAATTTACCAGCATACAATAAAAATTCCATACCATATTAGTGCCTATGAAATGATACATGTGCCC TTTTGAAAATCATTCGGCTGAAGCAGATGGGTTTTTAAGTTTATATCATGCATGGTATTCCAACTTTCCAAGGGAAAATCATATGATGCATGGTATTGTA AAAATTATATTCCAACTAAAGATAATGTTTACTAATTTATGGAAGA BLAST |
Tissue | pods |
Gene name | LI_gene_141898; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418089
Blastp | Chaperone protein DnaJ from Thermotoga with 37.7% of identity |
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Blastx | Chaperone protein DnaJ from Thermotoga with 36.07% of identity |
Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
Kegg | Link to kegg annotations (CTN_1726) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455557.1) |
Pfam | DnaJ domain (PF00226.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |