Ll_transcript_418091

• Id Trinity: TRINITY_DN46035_c0_g1_i9
• Name Transcript: Ll_transcript_418091
• Sequence: CCTCATTCCACAATCTATATATATATATATATATACTGATTTAAATAATAAGAATACAAATTAAAAAAAAGTATATATTAAGGTGCATGTTTCTGGATTG TTCATGAAGCCTGCTAAGGACAGGGATATTTTCTTTGCTCTTCACCTTTACTCCACGGAATCAAAGGCAGAGAATACTAAATTATGTAGTGTAAACACAA CTTGATATCCAAGTTGTGTAATATAATAATACATCACAATATATATATATATTTGATGGTATATATGTGATTATATATCATGCATTTTATATATATATGT TATGGTTATACAAAGTTTGAGTTGTTTCAATTCGTCGACAAGAAAACTTAGTTTGACAATTTGATTGGTTTTTTGGATATTTTTCCTCTGCTGCGGTTTT TCATAGCTTCTGGTTTGAAGGTTTGTATTTTTATTGTTGTTGGGAAAAATGGCTAATGAAGGAGATAAAGGCAATGATTTCTATGGTGTTCTGGGATTGA ATAAGGAGTGCACTGAATCAGAGCTCAGAATTGCTTATAAGAAACTTGCACTGAAATGGCACCCAGATCGTTGTTCAGCTTCTGGGAATTCTAAGTTTGT TGAAGAAGCTAAGAAGAAATTCCAGGCAATCCAACAAGCCTATTCTGTTTTATCTGACGCAAACAAGAGGTTAATGTACGACGTAGGAGTCTATGACAGT GATGATGACGAAAATGGTATGGGGGATTTCTTGAACGAAATGGTAACAATGATGAGCCAAACAAAACCAAATGAAAGTGGAGGGGAGAGCTTTGAGGAGT TGCAACAATTGTTTGAAGATATGTTTCAAGATGATATTAGATCAGATAGAAGAACCTCTCACACTACTGCTACTTGTTGTACTTCATCTACATGCATGAC TTTTAGTGAAACTTCTAGTTCAAATAAACGCAATTCCTCCGAGATGAATTTTGGGAGGGTGGATGATTCTTTTGATTTCAATGGTGGCTACCCGAACTTC TGTTTTGGGGTTAGTATATAAACTATACATTACACTTTTCATGTTTTTCATTTCATACAGCATCCATGGCATGCACAACATTTCTGTTTTGAGCATGATT CATTCGGGTATATATCTTTGCAAATTAGGCCAAGATAGAGTTAATTGGTTAAAAGAAAAGATAGTCTATTCTTGTTGAACATATCTATCTTAAGACTTAA GAGTCTGTTAATAAGTGGTATCTTTTGTGTTGTACATTTCCTCAAGGTTGGTCTTGTAAATTATCATTACCAATGAATGAGGATACAAAACAATGGAATG TATTTGAGGTATGTTGAAGTGGTAAGTTTTTGTGGAAGTCCCAATTTACATGGCATATTTCATGCATTGTAGCTTAGCTGGACTTCAATCCAAATAAGGC TTTGTTTATTGTGATTGAGCATTTCCTCTTGTTCTTGATGTGAAGACAGGTGAATCACATTCAAGATTTCAAGAAGCAAAAGGGAGGAATCCAAGAAGAA GGAGGTAAGAGTAGACATAGAAGTGGTAGAAAGCAAAAAATCTCACATGGTCATGATGTTTCTTCTGATGACTTCCCTAGCATTTCTGCTATGTAATGAA CTTGGTGGCATATTAGTTTGCATTTGGATATGTGAAATCCTTCATCTTTGACATGTTACAAAAGTATTAAGTACTCACTTCTAAGTCATTAAAAGTGGCA CTGTGGCATTTTCAATCTTTTGTAACCATGGTACAATCATGGCTAAGACTTTGAACTTAAATCAATTGATAACCCATCTTAGTCTCTTCAATTATGCAGA TTGCAGAGAATAATATTCTTGGTTTGCCTAAATTTGACAACAGAAAGAAAACATTATGTCATTTTTGAAGTTGGTCAATTCAGCATCTCATATGTTATAA GATATGTGATTTGCTTAGTCACAAATCTCACATTCCTTGAGATATTTTCTATGCATAATGAAAACAAAGTGGAACTATTAGAGGTTATAGTTGTATGACA ATGACTAATGAATCAAGCAAAATACAAATGGAAGGTGGTGGTTACTAATTTTATAAATGGAAGGGTCCTACATCACATGGGATATGGGACCCGGATAAGT ACTGTTGTATGATCCACTTGCAAAAGCCTATGCCTACATTTTTGGTATGGAAAGTTGAGCATAGTACAATAAACTAGTCAACTTAAAATAATGCAGATAG TTCAAATACACACTTCTAGTCTACTTTTGGTTTTGAAAGCCATTTGGGACCAAACAAGTAGCCAAATATGTCCAATGCTGGTGTTATGATTTATGGGTCC CATACACCCAATAATTGGTTGGCTATTGTTGTGAAAGTTGTAAGTGTGACTTGTGCTTAAAGTAAAAATCCATGTTAGAGATCAATACATCTAATATCTT ATGATGATAGATTTGCTTTGTGTTGTTATTCTTTATTTTTTGACTGATTTATTTGCATATATTCTTGGATATTAAGGTTCCACACACCTCTAGCAACATG TTTTAGAAAATATGGGCTCATTCTCTTATTATTAGATTGGGCCTGTATTATTGTACTTGGTATTTAAAGTTGAACGATTAATATCCATTGTGCTAATTGA ATGTTTTATTTTTCTTATTTAAACTAGATTATATTCATTTTGGTAAAACTTATATTTTAACAATTTTATAATATGCTTATCAAACTAATAAATCAGTTTT ACAGAAAAAATATAAACATTGATAGTATATGAGTTTTATATGTCATCATTATATCATTTAATGTTCATGTTTTATTACCGACTCATCAAAAAATTAATCC AATATAAATATCCTATAACTAGGGCTTAGCTTGAATCCAGTGAGGATTGGATGGGTAGTGATTGTTTAGACCCATACAAAGGGTGAAGTGTTTTGTGGGA TCTTTCTATGATGTAGGTACATTTTCGAGTAAAGTTTAAAGTAGCTGATTCTCAAGCAACCAAAAATCAAGAGGGGAAACAAACAGAAATTAAAGATCCA TCATTTTATTGATTTATTTTATATATACACACTCTATGTTATGATGAGATTATGATGTTCAATTATAATGACAATTTACCAGCATACAATAAAAATTCCA TACCATATTAGTGCCTATGAAATGATACATGTGCCCTTTTGAAAATCATTCGGCTGAAGCAGATGGGTTTTTAAGTTTATATCATGCATGGTATTCCAAC TTTCCAAGGGAAAATCATATGATGCATGGTATTGTAAAAATTATATTCCAACTAAAGATAATGTTTACTAATTTATGGAAGA
• Tissue: pods
• Gene name: LI_gene_141898;
• Additional information: details;

Expression of Ll_transcript_418091

FPKM

• PAB: 7.3
• PNAB: 0.4
• PS1: 0.4
• PS2: 2.6
• PS3: 1
• PW1: 1
• PW2: 1.7
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_418091

• Blastp: Chaperone protein DnaJ from Thermotoga with 37.7% of identity
• Blastx: Chaperone protein DnaJ from Thermotoga with 36.36% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (CTN_1726)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455559.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;