| Id Trinity | TRINITY_DN46038_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_417866 |
| Sequence | CCTCTTACTCGATTTTCTAATGGTAACATTATTTATCGACTTTGTTTAATCGATTAAAATTTCAATAATACATTATTGTTATATCGATATATTAATGTTT TTTTTAATATGATATCAGGGGTGGAGTTTAAGGTACCAAAGTTTGTAGTGATTGGACATAGAGGACATGGCATGAATGCTTTGCAATCTTTGGATAGAAG AATGAAAGCTATTAAGGAAAATTCAATTATGTCCTTTAATGCTGCAGCTAATTTTCCTATTGATTTCGTTGAATTTGATGTTCAGGTAATGATTCTTATA TTTCTTTTCTCACTTCATTTTTCAGAATAGTTGTCCATATTGAATGAGTCCGTGATCTAATAGTATAAGGTCTCGGCATACGGACACTTAATGAGAGAGA CAAAAAACTCGAAAAAGATTAGTTCTTTACGTGTTTTAACAATATAGTAAACAAGAAGTCATTGCTAAATTGGGACGGTTTTATCTGTTTTTTCTATGTT CTGTTTTGTTCGTGCGGTGTGATGTGTCTGTTTCTTAAGTTTTCAATTTTCCTGTTTTACAATTTTGCCCTTTGAGTTCAATAGGTTTTTCTGTAAATGA TTTATTTGTCATGGGTTTTTGTAAATTTGTTCATTGCTGAATTTATTTAACTTTGATTACTTGAATCAGTATTAACTGGTTTCTTGTGTTATGGGTGGGT TCTTTTATATGAAAGTTTCATGATTCTACTTTAAAAAGTTGAAAGTGTGAAGAATGAATGAGGAAAAGAAGAAAAAGTTAAAAGCAAAAGTGTTTTTTTT GTAGGTGACAAATGATGATTGCCCAGTCATTTTCCATGATGACTTTATCCTCTCCCACGAAAATGTAAGTTCATACCATCCCCATCTTGTATTATACGCT ATATCAATTTGGTCCCGAAAATTTTTAAAACTCGAAATGGGCGTGAAAGATATTAAATGTTAGTCAAATTAGACTTTTATTTTTTATGGTGACTAATCTG TCACACATTCGCGATCTTTAAGTAGTAATTTTAATTTTTCTCAATTTTCGGATCAAATTGGTACACCCGAAAATGAGATATCGACTCTATCCTTTATTAT TGAGAGTTGATTATGAATGTGCTTTGGAACTTTCTTCTACAGGGTGTTGTATTTGAGAAGAGAATCACAGAGCTACGTTTGTCAGAGTTTCTTGCCTATG GTCCTCAAAGAGAGGTTGGAAAGGATGGAAAAGTTTTAGTCAGAAAAACGAAGGATGGGAAAATAGTCCAATGGGAAGTTGAACAAGATGACTCACTTTG TACACTTGAAGAAGCTTTTCTGAAAGTTGAACCCTCTTTGGGTTTTAACATTGAGTTGAAATTTGATGACCACATTGTCTATGACCAAGATTATCTTACC CATGTTCTTAATGCAGTCTTAAAGGTTGTGTTTGGTCATGCCAAAAACAGACCTATTATCTTCTCAACTTTCCAACCAGATGCTGCATCACTAGTTAAGA AATTGCAAAGCACCTACCCTGTATTCTTCTTGACAAATGGAGGATGTGAAATCTATGAAGATGAAAGAAGGAACTCTTTGGAAGAAGCTTTAAAACTTTG TTTGGAGAATGGGTTGCAAGGAATTGTTTCAGAGATTAAAGGGGTATTCAGAAATCCTGGAGTAGTAACTAAGATCAAGGAATCTGAGCTTTCTCTCCTT ACATATGGATCATTAAACAATGTTCCAGAAGCAGTTTACATGCAACATCTAATGGGAATTGATGGGGTAATAGTGGATTTGGTCCAAGAAATAACAGAGG CAGTTGCAAATTTTATAACATCAGCAGTGATTGTTCATGAAGAGGGTTTAATTGAAGGGATGGGAAAGTTGCAACTACATTCCAACCCTAAATTCTCTCA GCAGGAACTATCTTTTCTTTGGAAGCTCATTCCACATTTGATACAGATTTGAAAATAAAACCATTCTATATAGCTTTTAGTTGATTTGTCCTTCTCACAA TAGGCCTTAGAATTCTTATTTCATGGGATTTGTTATCCAATTTTTATGAAACCTTAATCCCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_141910; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_417866
| Blastp | Glycerophosphodiester phosphodiesterase GDPD2 from Arabidopsis with 61.19% of identity |
|---|---|
| Blastx | Glycerophosphodiester phosphodiesterase GDPD2 from Arabidopsis with 61.19% of identity |
| Eggnog | glycerophosphoryl diester phosphodiesterase(COG0584) |
| Kegg | Link to kegg annotations (AT5G41080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437407.1) |
| Pfam | Glycerophosphoryl diester phosphodiesterase family (PF03009.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |