Id Trinity | TRINITY_DN46040_c1_g1_i12 |
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Name Transcript | Ll_transcript_417453 |
Sequence | TTTTTTCTTTTTACATAAAAACATATTTTCCATCGATCACTCACATTTTGTCGTAAATCAGGTGCTTTTCTTGAGATGATAATGTAGTGTTACTCCTTCC CACGCACGCTTTGCGAACCTTTCCCTCATATATAAACCTCTTTCATTCAGAGGCAGAAAAAAAGGAAAGGCTTCTGTGTTCAATGGGAGAAAAAGGTGAA TGCTCTGGAGTCAAACCCTCTGATGATGAAATCTGGGCAAAACTTGTTCCGTCAGACTCGAGATATTCAGACGTCGAGATAAGGTCAGACGAAAAAGTAA TATGTTCAGAGATATCAGCTGCATTTGGTGACAAACATAGCTGGTGCAAAATAATAAGGAATTCTGATCTATGTTCTGCTACAGTAGAAAACAAGAGTCC GAATACAATACTTGTTGATGGGACTGAGGTGCACAATGAGAACACTGTTGTCATCAAGGATGGAAGTGAAATTATTCCAGGTCCTGATAAAGGGGGATTT GTCAGCTACAGATTTGATATCTTGTCAAGCCCAGAAACCAGCCAGAGGCAGCTGCAGATCTGTGTTGATGTTGAGAATGCTAAGTGTAGCATTTGCTTAA ACATATGGCATGATGTTGTGACTGTTGCTCCATGCCTTCATAATTTTTGCAATGGTTGCTTCTCAGAGTGGTTAAGGAGATCACAAGAAAAACGTTCAAG TGTACTTTGTCCTCAATGCAGAGGAGTTGTTCAATTTGTTGGAAAAAACCACTTTCTGCGTACCATTGCAGAGGATATGCTAAAAGCTGATTCTTCCTTA AGACGCTCAGATGAAGAAGTTGCACTCTTAGATACTTATTCATCCGTACGATCAAACCTTGTCATTGGATCTGGAAAGAAGAATTGTCGAAAGAGAGCTC ACACCCCAGTGGATGATCAAAGTGATGGCACATACCTTCAGTGTCCACAATGTGTTCATGAAGTTGGTGGGTTTCATTGCAATAATAACACTGTTCATCT CCAATGTCAAGCATGTGGAGGAATGATGCCATCCCGGCTTGGTTTTAACATTCCTCAATATTGTTCAGGATGTGATAGATCATTTTGTGGAGCTTACTGG CATGCTTTAGGGGTAACGGGCAGTGGTCCTTACCCTATTTGCTCCCAGGATACTTTAAAACCTATCTCAGAACACTCTATCTCAAGAATCCCTTTGTTAG CACATGAAAATAATGTGCATGAACAGAATGTATGTGCTTTCTGATCCCCTTATTTTATCATTTTTTGTCTGTTTTAGCTTATCATTTTTACGGTCGTTAT CATTTATGATTTTCTAGATCACTGATAGTTGCATTAGACAAATGGGGAAGACATTACAAGATGTTGTATCAGAGTGGATAGTAAAGCTGAACAACAAAGA AATTGGTAAAGTGATAAATTTGTGTGCCCTGTAGTGCTTAATGAGAATTATTCTTCTGGGTTTTTCAGATTCCTGTTTCACATTTGCATACCATTCACAA AGAAATTTTTCAATAAAGTGGTAGCTTTTGTATAATATTCTTATAAACCGTTATACATTGTTGCAAAGATTGATGTGATGTACACCTGAGAGCTCGACTA TTCATACATAGGTTTCCTTGTCTCATTTTTCTGTTGGTGACTGCTTTTTATTTTTACACGCTTATCTCTCGTTTATCATGAGGTTTATGCTTTTGTTATA CGCCATTGATCATGTTTTTCTCTTAGCAGATGTAACACGTTTGGCGTTGAATCACGTTGAGACGATTAATGCTAGGACTTCTGTATGCTGGTAACCCTTT GTCCTGAATCATTGAAAGCTAAAGTGGAATTATCTAAATATTGTAACAGGTCCCATATCTCAGACATGTTGCATACTGCTCAACACTGAAAATAGTGTCA TACTGGATAATAGTTTATCTTATGTCTCTCTATATTAGATTAACATTGTGCTGGATCATTG BLAST |
Tissue | pods |
Gene name | LI_gene_141918; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_417453
Blastp | E3 ubiquitin-protein ligase CHFR from Homo with 25.51% of identity |
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Blastx | E3 ubiquitin-protein ligase CHFR from Homo with 25.51% of identity |
Eggnog | zinc ion binding(COG5243) |
Kegg | Link to kegg annotations (55743) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458160.1) |
Pfam | Ring finger domain (PF13639.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |