Ll_transcript_417445

• Id Trinity: TRINITY_DN46040_c1_g1_i4
• Name Transcript: Ll_transcript_417445
• Sequence: TTTTTTCTTTTTACATAAAAACATATTTTCCATCGATCACTCACATTTTGTCGTAAATCAGGTGCTTTTCTTGAGATGATAATGTAGTGTTACTCCTTCC CACGCACGCTTTGCGAACCTTTCCCTCATATATAAACCTCTTTCATTCAGAGGCAGAAAAAAAGGAAAGGCTTCTGTGTTCAATGGGAGAAAAAGGTGAA TGCTCTGGAGTCAAACCCTCTGATGATGAAATCTGGGCAAAACTTGTTCCGTCAGACTCGAGATATTCAGACGTCGAGATAAGGTCAGACGAAAAAGTAA TATGTTCAGAGATATCAGCTGCATTTGGTGACAAACATAGCTGGTGCAAAATAATAAGGAATTCTGATCTATGTTCTGCTACAGTAGAAAACAAGAGTCC GAATACAATACTTGTTGATGGGACTGAGGTGCACAATGAGAACACTGTTGTCATCAAGGATGGAAGTGAAATTATTCCAGGTCCTGATAAAGGGGGATTT GTCAGCTACAGATTTGATATCTTGTCAAGCCCAGAAACCAGCCAGAGGCAGCTGCAGATCTGTGTTGATGTTGAGAATGCTAAGTGTAGCATTTGCTTAA ACATATGGCATGATGTTGTGACTGTTGCTCCATGCCTTCATAATTTTTGCAATGGTTGCTTCTCAGAGTGGTTAAGGAGATCACAAGAAAAACGTTCAAG TGTACTTTGTCCTCAATGCAGAGGAGTTGTTCAATTTGTTGGAAAAAACCACTTTCTGCGTACCATTGCAGAGGATATGCTAAAAGCTGATTCTTCCTTA AGACGCTCAGATGAAGAAGTTGCACTCTTAGATACTTATTCATCCGTACGATCAAACCTTGTCATTGGATCTGGAAAGAAGAATTGTCGAAAGAGAGCTC ACACCCCAGTGGATGATCAAAGTGATGGCACATACCTTCAGTGTCCACAATGTGTTCATGAAGTTGGTGGGTTTCATTGCAATAATAACACTGTTCATCT CCAATGTCAAGCATGTGGAGGAATGATGCCATCCCGGCTTGGTTTTAACATTCCTCAATATTGTTCAGGATGTGATAGATCATTTTGTGGAGCTTACTGG CATGCTTTAGGGGTAACGGGCAGTGGTCCTTACCCTATTTGCTCCCAGGATACTTTAAAACCTATCTCAGAACACTCTATCTCAAGAATCCCTTTGTTAG CACATGAAAATAATGTGCATGAACAGAATATCACTGATAGTTGCATTAGACAAATGGGGAAGACATTACAAGATGTTGTATCAGAGTGGATAGTAAAGCT GAACAACAAAGAAATTGATGTAACACGTTTGGCGTTGAATCACGTTGAGACGATTAATGCTAGGACTTCTGTATGCTGTGATTGTTATCAGAAGTTGGTG TCATTTCTCCTATACTGGTTTCGGATTTCTATCCCGAAATACCGTCTTCCACCAGAAGCATCAGCAAGAGAAGATTGCTGGTATGGATATGCATGTAGGA CACAGCATCATAGTGAAGAACATGCTCGGAAAAGGAATCATGTATGCCGTCCAACAAGAGGCTCCAACATGTGATGATCGAGAAAATAATATATGCACCG ACAGTTCCGGAGCTTTTACACTATCAACACATCATCCATTCATGTGTTAAAATAAAAGTAATACACATGAATGAAGAAGTGAAAAACAAAGTGGTGTGTC TATTGGGTGTTGATTTTTCTTTATCTTTTGCATTTTAAGGAGCTTATAAAGAACTATGATGACAATCATTGACTTGCAATATAAGTTATCTTGAAATTTG GGGTTGCTAACATTATGGCTTAAGGTTTTTATACGGTTTAATGAAGTACAAATTATTTATGAAAATGGTTAAAAACTTAAGTTAAGCAATAAATTTTGAA TTATAGATTATAAATATTACTAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_141918;
• Additional information: details;

Expression of Ll_transcript_417445

FPKM

• PAB: 2
• PNAB: 11.8
• PS1: 13.9
• PS2: 9.7
• PS3: 16.3
• PW1: 10.2
• PW2: 10.1
• PW3: 7.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_417445

• Blastp: E3 ubiquitin-protein ligase CHFR from Pongo with 26.23% of identity
• Blastx: E3 ubiquitin-protein ligase CHFR from Pongo with 26.23% of identity
• Eggnog: zinc ion binding(COG5243)
• Kegg: Link to kegg annotations (100171543)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458160.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;