| Id Trinity | TRINITY_DN46044_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_418413 |
| Sequence | AAAAACTTGAACAAACTCAATTTGAAGCTCCTTCCCCTTCTCCCTCTATTCCTTAATCTGCACTACACCAAGCCACCAACTTCCCCAGATTCTCACAACT CTTAACTTCTCCATTTCCATCTTCCGATCAACCCTTTGGATTCATAAACTCGCCGTCTCAATAACCGTTTCCACAAAAAATGGGTTCTGTGTCGTCGACG CCGCGCAATGGCGTTGGCGCGTCATCGCCGGAAACGACGGAGTACCTGATTGAAACCTTCGTCGGTGAAAAGTCCTTCCCTATCTCGTCGGAGTTCTGGC AGAAGCTTCTAGAACTTCCTTTCTATGCTGAATGGCCCTCTCACCGTGTTCATCAAGCTTGCCACCTCTTGGCAAGAAACAACTGTTACACAAGGCATCT TGCAAAGATTTTGTTCCATCTGGCATGCTACTTGCAAGAGTCCATGTCTACTTCTGGTGCGCCGCCCTTGGTTTATGGAAAGGCTGTTAATGCAGTTCAC ATCACTTCAGTATTCCTAAAGCACTTGATTGAAAGTGCCGAAGGTGGTAATATCAACTTATACCTGTCTCTCCATGATGATGAATCAATATCAAAGGATA TTTTGGGAGATCAGACCATTGAAAATCTTGTTATGCGGAATGTTCTTAACTTCATAGCATCTATAGATGTGAGTCCCGACACATATCTCTTACATCTGGA GCTGCTTAATTTTATGATTATTGCAATGTCAACTCAGCTTCTTTGTGGGCCATCTCCTGGACTGAACGATGTGAATCCATTTCTTGATGCAGCAATAGAT CTGGATCGCTCTCTGGTTATTTCAGTTGTGCGAAAACTGCTTCTGAATTACATTACCCGACCCGGTGTTCCATTTAATCAAGAATCTGAAACTCAGAGTC ATATGCTAAAGAAAGTTGGCTCTGCAGCTGTAAATGTTGTTTCATTGCCATTCAGTTATTTGATCAGTTCAAGCAGTGAAGGATCCAGAAGTCCAATAGC AGATAGAAGCCTTAACATGCTTCTTGTCCTCATTCATTATCATAAACGTGTTGTGAGTGAGGGCTACTCTGCCATTGAGAATGATAATTCTTCCACTTCG AATTCTTTACTGAAGGAGAACACATATTTTTCTGACAACCCTTACTACACAGTCTTAGAGCATGTATCTGATTGTGAATTTGATCGAGCAGATGTTGAGA GTATTGCACACAGTGGTCCACTTGTAAAGTTGCCTTTTGCTTCGTTATTTGATACGCTTGGCATGTGCTTAGCTGACGAGACTGCTGTCCTGCTGCTTTA CTCATTGTTGCATGGGAATTCTGCCTTTCTGGATTATGTACTGGTTCGGACTGATCTGGATACATTGGTATGAGGAAGCGAACTTTGTCCAGTGAAAAAT GTAGGAATGAATTGATGTATTTCATATGTAAATATGTTGAAATCAAAAGAATAAAATTTTGAAGAATTGCTTGACTATCACATTGTATATTTAACTGCTT GTTTAATGCACATAAGCCATCCTAAATCTTAATCATATGGGTCTAACTGGTCCATCTACTACGACTGAGGATTGAAACTTATTCTGAGTCCTGCTTCTTA TGAAACTAACAGTTAATGCCCATTCTAGAAGCATTATATAATGCTCCAAGGAGGACAGCTAATCAAATTTATATGCTGTTGATTATACTTCTCATACTTA GTCAAGACTCTTCTTTCAATGCAAGCATTCATAAGCTGATATTGCCCACTATTCCTTGGTACAAAGAACGTCTCCTCCATCAGACTTCTCTAGGTTCTCT CATGGTCATCATTCTTATCAGAACTGTACAATATAATTTATCTAAACTACGGGTATGAATCATAAAGTGAGTTGAATTGTTATTTTAATAACCCATGTTT TTACACTGCATTTTCTGCTGACTGGTTGTTCAGTAAAATGTTTCATATCGTTAGTACATTGACTATAGTCCTGATGGCCATTAAGAGAGATGTGTTGACT GTTCTTATGAGATAGCTATTATGTATTAATGGGATATACAAATTGATTGATGCTACGGGTTGAGGTTTTTTCATATACAAAACACTACGTCCAGTTCATG TTTATTTCCAGGTACCTCACCTCCAAAAGCCCAAAATTTGATTTTGGATTCTAATTCTGAACTGCACATAACATGGTTTCTTTTATCCTTACCTTGACCC TATGGTAAAATGTGCCTGCCTTGAAATTCTATTCTGAATTTCAGAATCTCAAGCATTGATATATTCCTAAGCACATATATGTATTTGAATTTAATAAATA TTAAAATTTAAAGATTCTTGACTAGATAGCATAATTTTCACCCTTGTGTATGTGTAAGCTTTAAGTCTGCATTTATTTACATATTTAGTCTGTTTATATG TTTAGATGGTGTGCTAAAATTAGTTATTGTGCTGAATTTTAATAGGATGTATATCTTCATTCAACATGTCTGGCAACGTTGGCAAACATGGCACCCCATG TCCACCAACTAAGTGCATATGCATCTCAAAGACTAGTCGGGCTCTTTTATATGCTATCACGGAAGTATAACAAATTAGCAGATCTCAGAGATAATAAGAT TGATAATGCAAAAGGCAACTTGATTGAAGGAAGTAGCGTTGTTAAAGATGTGTCAGCTGAGTTACACATCTATACCGACTTCTTGAGACTTGTACTAGAA ATTATAAATGCAATCCTGACTTATGCACTGCCTCGAAATCCCGAGGTAGTGTACTCAATAATGCAGAAACAGGAAGTCTTCCAACCATTCAAGAATCATC CTAGTTTCAATGAGTTGCTTGAAAACATTTATACCGTCTTAGATTACTTTGAAAGTCGGATGGATGCTCAAAGAATGGATGGTAACTGGTCAGTCAATGA GGTGCTCCAAGTGATAATTGTCAATTGTCGGTCTTGGCGGGTTGAAGGGATGAAGATGTTTACTCAACTGCACTTCACTTACGAGCAAGAGAGTCACCCA GAGGAGTTTTTTATCCCATATGTCTGGCAGCTAGTACTATCGAAATGTGGTTTCAAATTCAACACGGCAGCCATAAACTTGTTTCCAGTTGATCCACCTA CAGAAAGACTTGAGAATGGGGTGGTGGGAAGTACACTCCGAAATAGTGACATTGAAAAATCTGAGTATGAGCTTGATCCATAGCTGGGTCGACAAACTTG CCTGCTAAAAATTATATAGTTTTATTAGTGGATGTTGTTTGTACACATTTGCAAAAATGTAATGTCCTCGTTCTTTTCTGTTAATAAATTTTGGACTGTA AAGGTTTTTCTTTATATGAAAAAATGAGATATGTGTCATCATTAATCAATGAGAATAAAATATCTCATGGTATAAAGAAGATATGTTATCTTTTCTTATC ACTGAAATTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_141927; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418413
| Blastp | Dymeclin from Dictyostelium with 23.06% of identity |
|---|---|
| Blastx | Dymeclin from Xenopus with 38.71% of identity |
| Eggnog | dymeclin(ENOG410XP0J) |
| Kegg | Link to kegg annotations (DDB_G0292524) |
| CantataDB | Link to cantataDB annotations (CNT0001914) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432529.1) |
| Pfam | Dyggve-Melchior-Clausen syndrome protein (PF09742.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |