Ll_transcript_418382

• Id Trinity: TRINITY_DN46045_c0_g1_i1
• Name Transcript: Ll_transcript_418382
• Sequence: CTTGTGGAGGTACGGTTTGTTTGATTCAATTTGTAAATAATATGATTATAAAGATAATCTTAATATCTAAAAGTCCAGATTAAAAAAATCAAAATTTTCC ACTCAAAAACAGCTTTAGATAACCGCTTATGTTGTTCTTAAACACCTATTTCCTCTCTAGGTTATTCTTTGGAGCAGGAACAACTGTTTTTCCCAAAAAA AGTCAAACAAAGCTGATCCTGTTGGGAGCTTCAAGAGCTATGCCTTCTTCATCTTATCCTGTTATTCCTACTTCGTCAGTGAAGGCTGCATCGACGAATT CCAACATCGGAAGTGCAGGACACATGTTATCAAATCGTGCCAAATGCGGTGATGACATCCCTTTTTCACCTGTCTCAGAAATACACTCTCCAGCATTCAT TTCTTATCCTCATGGAAATGGTGATATTTCATGGGATCAGTACCCGTTTCAGGATTTTATCAAGTTTCCTGATAGTGTTCCCATCCAGAACAATCAGGTT GAACACAGTGCTTCTTACATATCTGGTGAAAATGCCCAAACAACTGATCTCGGTGAGTGGGCTGATGTTGATCAGTTACTCTCAGCCGATGATTCTCTTT TCCCAATTTGGGGTCAGTTTCTTGGTGATAGTCATGTTGCAGAACCAAAGCTAGAGGTGACCCAGGTTTCACAGCAACAGCATGCACAATCTAAAGAAGT TAAATGTCTTCCTAACTCAGTGTCAACTGCACCGCAAACGAAGTCAAGAATGCGTTGGACTCCCGAACTTCACGAGGCCTTTGTTGAAGCAGTGAATCAG CTTGGCGGTAGTGAAAAGGCTACTCCAAAGGGTGTCTTGAAGCTAATGAAAGTTGAAGGCCTTACCATCTATCATGTGAAAAGCCACCTACAGAAGTATA GAACTGCCAGATACAAACCTGAGCCATCAGAAGTAAGTTCTGAGAAAAAGTTGACTGAAGTCGAAGAAATGAACTCTCTAGACATAAAAACGTGAGTTTT CCCCTTCCCTTCCTTTATGCAAAAGTTTTTCTCATTACATTGACACATTTGTTGACCGATCCTTCTTCCGGTGTGGATCCTTTGCTCTTGTTGCGTGGCT GCATGCATTGCGCAGATGTAATGTTCACTTAATATAACTTTTCCCCTGTTATCATATATTTGAATTTAAGATATAACATAATTCAGATGGGTGGTAAAAA CAGGCCTGAACAGGTTCAACATTCACTATGGCTATGACACTTATTGTCCTCATTTCAAATACATACTGTTCTTCCATTTGCTTTTAATTGTATTGAAATG CATAATTAATAATCAGAGAATACTTCGGATTGCGGTTACAGGAACAAGGGGATCACCGAAACACTGCGATTGCAGATGGAACTCCAGAAGCGACTTCATG AACAACTTGAGGTTCAAAGAGAGTTACAGATTCAAATTGAAAACCAAGGGAAGCGTCTTCAGATGATGTTTGAGAAACAGATAGAGATGGAAAAACCTTC TTCTCCGATATCAAACACGGCGGCTGTGCTACCTTCTCCTATAGACAATTTTGAAACCATCAATGAGGATCATGAAAAAGTTCGAATCAACAGTAGTACT AGCACACCAGAAACCTTACCGGAAGAAAAGTCGAAGGACGCAAGCACAAAGCAAAAGAGAGATTATGCTAAAGAGGCCGGCGAACATGAGCTGAGAGATG ACCAGTGTGCTGCACCACTCTCAAAACGGGTGAAGAGTTTATGAAGGTAGAACTATTCTCTAACTTAAAAAGGGATCTACTATCTAGTGATTAGTGTTTC TGCTTCTAGAGATGACAAGATGGATTTCGGATTTTCACTTTCTGCTTATGACTATGGCTTTCCCTTAATCACTGATTCAGTTTCAACTTCCTATTTCTTG TCCTTGATTTGAGGTAAATTTTGCAGTGGGAAATTTTACTTCAAAGATTTGTTGTATATGTACATAAGGTGCTCTTTAGGTAACAAATTTTTGCACTAAA TAAAACTCTAACCAATTGGATGTGTTTAGTGTTAAGTCTCACATCATTTGAGTAATGAACTATTTATAAAGACTTGGATAACCTCGAGATAGGTGATCTC TATTCGACATATATTTAGTTCTTATACAAACTTAACTCTCCAAATGTCGGACAATAACTTGTACAATTCTATTCATATTCTCTTTATACTAGTTACTACA ACTTCATAACTATGACTAAATGTTAACTTGCCCAATTTTTGTTTAC
• Tissue: pods
• Gene name: LI_gene_141932;
• Additional information: details;

Expression of Ll_transcript_418382

FPKM

• PAB: 2
• PNAB: 0.7
• PS1: 0.4
• PS2: 1
• PS3: 0.3
• PW1: 0.8
• PW2: 0.6
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_418382

• Blastp: Protein PHR1-LIKE 1 from Arabidopsis with 51.76% of identity
• Blastx: Protein PHR1-LIKE 1 from Arabidopsis with 51.74% of identity
• Eggnog: MYB family transcription factor(ENOG41113XD)
• Kegg: Link to kegg annotations (AT5G29000)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439919.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;