Ll_transcript_418397

• Id Trinity: TRINITY_DN46045_c0_g1_i14
• Name Transcript: Ll_transcript_418397
• Sequence: CTTGTGGAGGTACGGTTTGTTTGATTCAATTTGTAAATAATATGATTATAAAGATAATCTTAATATCTAAAAGTCCAGATTAAAAAAATCAAAATTTTCC ACTCAAAAACAGCTTTAGATAACCGCTTATGTTGTTCTTAAACACCTATTTCCTCTCTAGGTTATTCTTTGGAGCAGGAACAACTGTTTTTCCCAAAAAA AGTGATATGAACTAAACAACCTCATCTGCATGTTTGGGCCTGTTATTAGATTTCTGATGAACTTTCTCACTTCCATCTATATTATGGATCTTTTGTAACT TAACTTTTCAGAGGAACCATTAGCTTATACTCTCAAGTAGTGAGATATGAACAAATTGGTTTAAGGAATTAGTGTATATTTTGTCAATTCTGTTATTTGC ACATATAATTTGTCATTAGTGGTTGATTAGTTGACATAGAACCTACTTTTCATATTGAAAACAGGTCAAACAAAGCTGATCCTGTTGGGAGCTTCAAGAG CTATGCCTTCTTCATCTTATCCTGTTATTCCTACTTCGTCAGTGAAGGCTGCATCGACGAATTCCAACATCGGAAGTGCAGGACACATGTTATCAAATCG TGCCAAATGCGGTGATGACATCCCTTTTTCACCTGTCTCAGAAATACACTCTCCAGCATTCATTTCTTATCCTCATGGAAATGGTGATATTTCATGGGAT CAGTACCCGTTTCAGGATTTTATCAAGTTTCCTGATAGTGTTCCCATCCAGAACAATCAGGTTGAACACAGTGCTTCTTACATATCTGGTGAAAATGCCC AAACAACTGATCTCGGTGAGTGGGCTGATGTTGATCAGTTACTCTCAGCCGATGATTCTCTTTTCCCAATTTGGGGTCAGTTTCTTGGTGATAGTCATGT TGCAGAACCAAAGCTAGAGGTGACCCAGGTTTCACAGCAACAGCATGCACAATCTAAAGAAGTTAAATGTCTTCCTAACTCAGTGTCAACTGCACCGCAA ACGAAGTCAAGAATGCGTTGGACTCCCGAACTTCACGAGGCCTTTGTTGAAGCAGTGAATCAGCTTGGCGGTAGTGAAAAGGCTACTCCAAAGGGTGTCT TGAAGCTAATGAAAGTTGAAGGCCTTACCATCTATCATGTGAAAAGCCACCTACAGAAGTATAGAACTGCCAGATACAAACCTGAGCCATCAGAAGTAAG TTCTGAGAAAAAGTTGACTGAAGTCGAAGAAATGAACTCTCTAGACATAAAAACGAACAAGGGGATCACCGAAACACTGCGATTGCAGATGGAACTCCAG AAGCGACTTCATGAACAACTTGAGGTTCAAAGAGAGTTACAGATTCAAATTGAAAACCAAGGGAAGCGTCTTCAGATGATGTTTGAGAAACAGATAGAGA TGGAAAAACCTTCTTCTCCGATATCAAACACGGCGGCTGTGCTACCTTCTCCTATAGACAATTTTGAAACCATCAATGAGGATCATGAAAAAGTTCGAAT CAACAGTAGTACTAGCACACCAGAAACCTTACCGGAAGAAAAGTCGAAGGACGCAAGCACAAAGCAAAAGAGAGATTATGCTAAAGAGGCCGGCGAACAT GAGCTGAGAGATGACCAGTGTGCTGCACCACTCTCAAAACGGGTGAAGAGTTTATGAAGGTAGAACTATTCTCTAACTTAAAAAGGGATCTACTATCTAG TGATTAGTGTTTCTGCTTCTAGAGATGACAAGATGGATTTCGGATTTTCACTTTCTGCTTATGACTATGGCTTTCCCTTAATCACTGATTCAGTTTCAAC TTCCTATTTCTTGTCCTTGATTTGAGGTAAATTTTGCAGTGGGAAATTTTACTTCAAAGATTTGTTGTATATGTACATAAGGTGCTCTTTAGGTAACAAA TTTTTGCACTAAATAAAACTCTAACCAATTGGATGTGTTTAGTGTTAAGTCTCACATCATTTGAGTAATGAACTATTTATAAAGACTTGGATAACCTCGA GATAGGTGATCTCTATTCGACATATATTTAGTTCTTATACAAACTTAACTCTCCAAATGTCGGACAATAACTTGTACAATTCTATTCATATTCTCTTTAT ACTAGTTACTACAACTTCATAACTATGACTAAATGTTAACTTGCCCAATTTTTGTTTAC
• Tissue: pods
• Gene name: LI_gene_141932;
• Additional information: details;

Expression of Ll_transcript_418397

FPKM

• PAB: 5.5
• PNAB: 4.3
• PS1: 2.3
• PS2: 3.7
• PS3: 2.4
• PW1: 6.3
• PW2: 9.2
• PW3: 5.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_418397

• Blastp: Protein PHR1-LIKE 1 from Arabidopsis with 55.92% of identity
• Blastx: Protein PHR1-LIKE 1 from Arabidopsis with 55.92% of identity
• Eggnog: MYB family transcription factor(ENOG41113XD)
• Kegg: Link to kegg annotations (AT5G29000)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439919.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;