| Id Trinity | TRINITY_DN46045_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_418392 |
| Sequence | CTTGTGGAGGTACGGTTTGTTTGATTCAATTTGTAAATAATATGATTATAAAGATAATCTTAATATCTAAAAGTCCAGATTAAAAAAATCAAAATTTTCC ACTCAAAAACAGCTTTAGATAACCGCTTATGTTGTTCTTAAACACCTATTTCCTCTCTAGGTTATTCTTTGGAGCAGGAACAACTGTTTTTCCCAAAAAA AGTGATATGAACTAAACAACCTCATCTGCATGTTTGGGCCTGTTATTAGATTTCTGATGAACTTTCTCACTTCCATCTATATTATGGATCTTTTGTAACT TAACTTTTCAGAGGAACCATTAGCTTATACTCTCAAGTAGTGAGATATGAACAAATTGGTTTAAGGAATTAGTGTATATTTTGTCAATTCTGTTATTTGC ACATATAATTTGTCATTAGTGGTTGATTAGTTGACATAGAACCTACTTTTCATATTGAAAACAGGTCAAACAAAGCTGATCCTGTTGGGAGCTTCAAGAG CTATGCCTTCTTCATCTTATCCTGTTATTCCTACTTCGTCAGTGAAGGCTGCATCGACGAATTCCAACATCGGAAGTGCAGGACACATGTTATCAAATCG TGCCAAATGCGGTGATGACATCCCTTTTTCACCTGTCTCAGAAATACACTCTCCAGCATTCATTTCTTATCCTCATGGAAATGGTGATATTTCATGGGAT CAGTACCCGTTTCAGGATTTTATCAAGTTTCCTGATAGTGTTCCCATCCAGAACAATCAGGTTGAACACAGTGCTTCTTACATATCTGGTGAAAATGCCC AAACAACTGATCTCGGTGAGTGGGCTGATGTTGATCAGTTACTCTCAGCCGATGATTCTCTTTTCCCAATTTGGGGTCAGTTTCTTGGTGATAGTCATGT TGCAGAACCAAAGCTAGAGGTGACCCAGGTTTCACAGCAACAGCATGCACAATCTAAAGAAGTTAAATGTCTTCCTAACTCAGTGTCAACTGCACCGCAA ACGAAGTCAAGAATGCGTTGGACTCCCGAACTTCACGAGGCCTTTGTTGAAGCAGTGAATCAGCTTGGCGGTAGTGAAAAGGCTACTCCAAAGGGTGTCT TGAAGCTAATGAAAGTTGAAGGCCTTACCATCTATCATGTGAAAAGCCACCTACAGAAGTATAGAACTGCCAGATACAAACCTGAGCCATCAGAAGTAAG TTCTGAGAAAAAGTTGACTGAAGTCGAAGAAATGAACTCTCTAGACATAAAAACGTGAGTTTTCCCCTTCCCTTCCTTTATGCAAAAGTTTTTCTCATTA CATTGACACATTTGTTGACCGATCCTTCTTCCGGTGTGGATCCTTTGCTCTTGTTGCGTGGCTGCATGCATTGCGCAGATGTAATGTTCACTTAATATAA CTTTTCCCCTGTTATCATATATTTGAATTTAAGATATAACATAATTCAGATGGGTGGTAAAAACAGGCCTGAACAGGTTCAACATTCACTATGGCTATGA CACTTATTGTCCTCATTTCAAATACATACTGTTCTTCCATTTGCTTTTAATTGTATTGAAATGCATAATTAATAATCAGAGAATACTTCGGATTGCGGTT ACAGGAACAAGGGGATCACCGAAACACTGCGATTGCAGATGGAACTCCAGAAGCGACTTCATGAACAACTTGAGGTTCAAAGAGAGTTACAGATTCAAAT TGAAAACCAAGGGAAGCGTCTTCAGATGATGTTTGAGAAACAGATAGAGATGGAAAAACCTTCTTCTCCGATATCAAACACGGCGGCTGTGCTACCTTCT CCTATAGACAATTTTGAAACCATCAATGAGGATCATGAAAAAGTTCGAATCAACAGTAGTACTAGCACACCAGAAACCTTACCGGAAGAAAAGTCGAAGG ACGCAAGCACAAAGCAAAAGAGAGATTATGCTAAAGAGGCCGGCGAACATGAGCTGAGAGATGACCAGTGTGCTGCACCACTCTCAAAACGGGTGAAGAG TTTATGAAGGTAGAACTATTCTCTAACTTAAAAAGGGATCTACTATCTAGTGATTAGTGTTTCTGCTTCTAGAGATGACAAGATGGATTTCGGATTTTCA CTTTCTGCTTATGACTATGGCTTTCCCTTAATCACTGATTCAGTTTCAACTTCCTATTTCTTGTCCTTGATTTGAGGTAAATTTTGCAGTGGGAAATTTT ACTTCAAAGATTTGTTGTATATGTACATAAGGTGCTCTTTAGGTAACAAATTTTTGCACTAAATAAAACTCTAACCAATTGGATGTGTTTAGTGTTAAGT CTCACATCATTTGAGTAATGAACTATTTATAAAGACTTGGATAACCTCGAGATAGGTGATCTCTATTCGACATATATTTAGTTCTTATACAAACTTAACT CTCCAAATGTCGGACAATAACTTGTACAATTCTATTCATATTCTCTTTATACTAGTTACTACAACTTCATAACTATGACTAAATGTTAACTTGCCCAATT TTTGTTTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_141932; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418392
| Blastp | Protein PHR1-LIKE 1 from Arabidopsis with 51.76% of identity |
|---|---|
| Blastx | Protein PHR1-LIKE 1 from Arabidopsis with 51.74% of identity |
| Eggnog | MYB family transcription factor(ENOG41113XD) |
| Kegg | Link to kegg annotations (AT5G29000) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439919.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |