| Id Trinity | TRINITY_DN46046_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_418581 |
| Sequence | GGCAAATTCGGGTTATGATTTTTGCTATACCGAACCCGAACCCGAACCCGATCAAATCGAGTTCCCTTCAGATTCGGTTCGGACCGTACCCACATATTCG GTTTTTATTCCCATGCAAAAGGACTACATACGAGATAGCAAAAATGAAACTTGGAGATTTAAAAGTGAGATTTCCCTCCACAATTTTAAACGTTAAACAC AACACACAAGAAATTAGCGAGAGAAACAAGAAGTTGAAGGAAGAAGAAGAATATGAATAGGTTTTTCAACCGAGGAAGGGATAATCCCTCCAATGCCTCA CCATCTTCCTCGCCGGCGACGCCCTCTGCCTCGCCGGTCACCGGTCCGGCGAGGCCTATACGACTCGTCTATTACGATGAGAACGAGAGAAAGTTCCACA TGGACCCTGAAGCCGTTGCTACGCTCCAACTCGTCAAGGAACCAATCGGCGTCGTTTCTGTCTGCGGAAGGGCTCGCCAGGGCAAGAGCTTCATTCTCAA TCAGCTTCTCGGGAGGAGCAGTGGGTTTCAAGTTGCACCAACACATCGACCATGTACCAAAGGGCTTTGGCTGTGGAGTGCACCTTTGAAGAGAACTGCT CTTGATGGAACAGAGTACAATCTCCTGCTATTAGACAGTGAGGGAATAGATGCTTATGATCAAACGGGAACGTATAGCACCCAAATCTTCTCCTTGGCTG TCCTCTTGTCTAGCATGTTCATTTATAATCAGATGGGTGCTATAGACGAGTCTTCCCTTGATCGTCTTTCTCTTGTTACTCAAATGACAAAGCACATTTG TGTTAGAGCCTCAGGAGGAAGGAGTACTGCATCTGAACTCGGGCAGTTTTCCCCAATTTTTGTTTGGCTTTTAAGAGACTTCTACTTGAACCTAGCAGAA GATAACAGAAGAATAACTCCCCGTGACTATTTGGAAATTGCTTTGAGGCCTGTTGAAGGGAGTGGAAGAGATATAGCTGCTAAAAATGAGATTCGAGATT CTGTTCGGGCTCTATTCCCAGACAGGGAATGCTTCACCCTTGTTCGACCTTTGAACAACGAAAATGATCTACAGCGTCTTGAACAGATATCGTTGGAAAA GTTACGGCCTGAATTTCGATCTGGTCTGGATTCTTTGGTCAAGTTTGTTTTTGAGAGAACAAGGCCAAAACAAGTCGGGGCAACTATGATGACAGGCCCT GTGCTGGTTGGTATTACCCAATCTTATCTGGATGCTCTCAACCATGGTGCTGTACCCACAATTTCATCCTCCTGGCAGAGTGTTGAAGAAGCTGAGTGTC GTAGAGCTTATGATTCTGCCGCTGAAGTGTATATGTCTTCTTTTGATCGTTCAAAGCCACCTGAGGAAGTTGCTTTGAGGGAAGCACATGATGAAGCAGC TCGACTTTCAGTAGCTGCGTTTAGCACTAGTGCTGTGGGAGTTGGTTCAACAAGGAATAAATATGAAGGCCTTCTACAGAAATTCCTTAAAAAGGCATTT GAGGATTTTAAGAGGAGTGCATTTATGGAGGCTGATCTACAATGCTCAAGTGCCATACAGTCTATGGAAAAGAGGCTGAGGGCAGCTTGTAATGCTTCTG ATGCCAAAATAGATAATGTTTCCAAGGTTTTGGATGCTCTTTTATGTGAATATGAAAAAACAATTCAAGGTCCAGGGAAGTGGCACAAACTTGCTGTCTT TTTACAACAAAGTTTTGAAGGCCCAGTACTAGATCTGACTAGGAGGCTAATAGATAAAGTTGTATCAGAAAAGAGTTCTCTCACTTTAAAATGTCAGTTG ATTGAAGATAATTTGGCCTTGCTCAACAAGCGGATGGAAGCCAGTGAAAGGGAAAAGTCGGAGTATATTAAGCGCTATGAGGATGCTATGAAAGATAAGA AGAAGCTAGCTGAAGAATATATGAATCGCATAACTGAACTGCAGGCTAACCGTCACTCATTGGACGAGAGGTATTCTAGCTTATTAAAAACATTGGACTC TACCAAGCAAGAATCCATTGATTGGAAAAGAAAATATCAACAAGTTTTATCGAGGCAGAAAGCTGAGGAAGATAATACTAGTTCTGAATTAGCAGCCCTC AAATCCCGGAGCAGTGCTGCTGAAGCAAGGTTGGCTGCTGCAAAGGAACAATCTGAGTCTTCTCAACAGGAGGCTGAGGAGTGGAAGCGGAAGTATGACA TTGCTGTTAGAGAAGCAAAAGCTGCACTAGAGAAAGCGGCAATCGTGCAGGAGCGAACTGGCAAGCAAACACAATTGAGGGAAGATGCTTTAAGAGAAGA ATTTTCTGGCACATTGGCTGAAAGAGAAGATGAAATAAAGGAGAAAACTTCCAAAATTGAGCATGCTGAGCGGTGTTTAACTACTTTGAATTTAGAATTG AAGGCTGCTGAGTCAAAAATTAGGAGTTACGAAGTGCAAACATCATCACTGGTGCTTGAAATCGAAGAGTTGTCTGAGAGGTTGAAAACTGAAAATGCCA AGGCCCAATCATTTGAGAGGGATGTGTTGGTATTTCAGCAGGAGAAGAACCATTTAGAGCAGAAGTACAGATCCGAGTTCCAAATATTTGAGGAGGTCCA GGAAAGGTGTAAAAATGCTGAAAGAGAAGCTGCAAGGGCTACTGAAGTGGCTGACAAAGCACGGGTTGAAGCAGGCATGGCCCAGAAGGAGAAGAGTGAG ATGGAGAGGATTGCAATGGACAGGCTAGCACATATTGAGAGGGCTCAGAAGAAAATTGAAAGCTTGGAGAGGGAGAAATATAATGCGGTAGATGAATTGC AAAGAGTAAGGGATTCAGAGAATGATGCACTTACCAGAGTTTCAGAACTGGAGGAAAAGGTGGAACAGAGAGAGAAGGATATTGATGCACTTTTGGAGAA AGATGGAACAAACAGAAGAAATAACACACATATTCTTGAGCAACTTTTGGAAACAGAACGTGAAGCACATAATCAGGCAAGTAACAGGGCTGAGGCTCTT TCTATCCAGTTACAATCTGCACAAGCCAAAATTGATTCTCTTCATCAAGAGCTGACTAAGTTTCGACTGAACGAAAGAGTATCAGACAGCAAGCTAAAAA CTGCGTCTCATGGAAAGCGTTTAAGAATAGAAGATGAAATTGGTGATGAATCTATGAGTCCTAGAATAAAGGGAACTAAGAGAGCCAAGAGTACTTCTCA TCCTATTGGGTACACACCTCCAGAAGATGGTGGTTCCTTTTTTGAGTGTGATGACAACATCCATAGTCTGCAAACAACTGAGGATGAATATAAAAAGTTT ACCGTTCAGAAACTTAAACAAGAGCTGACAAAACACAACTACGGTGATCAGCTGCTTGCGTTGAAGAATCCCAAGAAGGATGCTCTCCTCGCCTTGTACG AGAAATATGTTCTTCAGAGATCATAGCAGTTACGAAGAGGTCGTAGTATTACGATGAAGCATGTAATCAGAAATCATCAGCTTCAAACTCTACACAGATG TGTATTCCATATAAACCTCATTCACGTTTTATTGTGTACTAGTTATGTTTACTTGAGTTTGCTAGCAATCATCATCTGAATTGGCCTAAGATTGATGGAT GGTCTGATCCAGATTTGTTGTATGCTTAAGTTGTTTGGTTGATATTTAGTAGTTGTATTTTGTATTTATATACGATTTTTTAACCTATGTTACTAGATAC ATATCATAACCCCTTCATCACTACACCATCTTAAGTTGCATTTACATGTTGTTGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_141936; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418581
| Blastp | Guanylate-binding protein 6 from Pongo with 32.08% of identity |
|---|---|
| Blastx | Guanylate-binding protein 1 from Mus with 29.43% of identity |
| Eggnog | Guanylate binding protein(ENOG410XR6Z) |
| Kegg | Link to kegg annotations (100172797) |
| CantataDB | Link to cantataDB annotations (CNT0002289) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440227.1) |
| Pfam | Guanylate-binding protein, N-terminal domain (PF02263.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |